RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 XPO1O14980 1071 aaKnown RBP13.36□□□□□ -0.27
CACNB3-219ENST00000551544 CD4P01730 458 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 PRKCGP05129 697 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 ANPEPP15144 967 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 AOC1P19801 751 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 ARRB2P32121 409 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 GLUD2P49448 558 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 TAF6P49848 677 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 ACTR3P61158 418 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 DEUP1Q05D60 604 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 HFE2Q6ZVN8 426 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 OSTM1Q86WC4 334 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 CCNJLQ8IV13 435 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 B3GALNT2Q8NCR0 500 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 GSTCDQ8NEC7 633 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 AZIN2Q96A70 460 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 ZNF669Q96BR6 464 aaPredicted RBP13.36□□□□□ -0.27
CACNB3-219ENST00000551544 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 PPP1R12CQ9BZL4 782 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 LRRC4Q9HBW1 653 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 RCOR3Q9P2K3 495 aaPredicted RBP13.36□□□□□ -0.27
CACNB3-219ENST00000551544 COPG2Q9UBF2 871 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 SCOCQ9UIL1 159 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 ADCY6O43306 1168 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 SIN3BO75182 1162 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 USP1O94782 785 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 RALBP11234 206 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 NCF2P19878 526 aaPredicted RBP13.36□□□□□ -0.27
CACNB3-219ENST00000551544 GP5P40197 560 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 SNAPC2Q13487 334 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 RALGPS1Q5JS13 557 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 TNIP3Q96KP6 325 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 SORT1Q99523 831 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 ZNF184Q99676 751 aaPredicted RBP13.36□□□□□ -0.27
CACNB3-219ENST00000551544 SGIP1Q9BQI5 828 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 NAT9Q9BTE0 207 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 PIGVQ9NUD9 493 aa13.36□□□□□ -0.27
CACNB3-219ENST00000551544 FAM72CH0Y354 149 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 MAP3K13O43283 966 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DAB1O75553 588 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 ATP5BP06576 529 aaKnown RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 CYP2C9P11712 490 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DARSP14868 501 aaKnown RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 NOS2P35228 1153 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 CPOXP36551 454 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 IDH3AP50213 366 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 EPHB1P54762 984 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 AP2B1P63010 937 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 HIC1Q14526 733 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 RABGAP1LQ5R372 815 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 FAM72AQ5TYM5 149 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 FAM72DQ6L9T8 149 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 FAM72BQ86X60 149 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DCLK2Q8N568 766 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DNAAF3Q8N9W5 541 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 SIKE1Q9BRV8 207 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 MED10Q9BTT4 135 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DUSP16Q9BY84 665 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 CYP4F11Q9HBI6 524 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 SNX15Q9NRS6 342 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 A0A088AWK7 358 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 KLHL2O95198 593 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 CPA3P15088 417 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 GARSP41250 739 aaKnown RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 ABCE1P61221 599 aaKnown RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DBN1Q16643 649 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 STRA8Q7Z7C7 330 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 MYLK4Q86YV6 388 aaPredicted RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 PLD6Q8N2A8 252 aaKnown RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 SLC7A14Q8TBB6 771 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 TMEM40Q8WWA1 233 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 DNAJB3Q8WWF6 145 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 NPY6RQ99463 290 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 AGAP2Q99490 1192 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 GDAP2Q9NXN4 497 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 NDE1Q9NXR1 346 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 PPM1HQ9ULR3 514 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 STAP1Q9ULZ2 295 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 SORCS3Q9UPU3 1222 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 LOC100653049A0A140TA62 436 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 AP1G2O75843 785 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 KRT34O76011 436 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 MX2P20592 715 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 GRK2P25098 689 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 COPAP53621 1224 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 NAB1Q13506 487 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 PEX6Q13608 980 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 RNF169Q8NCN4 708 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 AGR3Q8TD06 166 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 CPNE1Q99829 537 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 APOL2Q9BQE5 337 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 OXCT2Q9BYC2 517 aaPredicted RBP13.35□□□□□ -0.27
CACNB3-219ENST00000551544 C1orf21Q9H246 121 aa13.35□□□□□ -0.27
CACNB3-219ENST00000551544 CAB39LQ9H9S4 337 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms