RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TSGA13Q96PP4 275 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 KLF6Q99612 283 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MLPHQ9BV36 600 aaPredicted RBP11.81□□□□□ -0.52
RAB5C-208ENST00000551338 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 SIK2Q9H0K1 926 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 CRISPLD1Q9H336 500 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 FBXO44Q9H4M3 255 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 UGT1A7Q9HAW7 530 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 UGT1A10Q9HAW8 530 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 UGT1A8Q9HAW9 530 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 FGFR1OP2Q9NVK5 253 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 SYBUQ9NX95 663 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 ZNF180Q9UJW8 692 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 GRID1Q9ULK0 1009 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 MAD1L1Q9Y6D9 718 aa11.81□□□□□ -0.52
RAB5C-208ENST00000551338 WDR27A2RRH5 827 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 TRIM49D1C9J1S8 452 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 H7C4K7 107 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 MYO1CO00159 1063 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 FGF10O15520 208 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ZBTB24O43167 697 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 SOAT2O75908 522 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 SUN1O94901 812 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 AP2A1O95782 977 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ALDH2P05091 517 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 HAPLN1P10915 354 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 KRT4P19013 534 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 NFKB1P19838 968 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 RPA3P35244 121 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 PBX3P40426 434 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 CCNFP41002 786 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 NEK3P51956 506 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 CCL23P55773 120 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ARPP19P56211 112 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 IL9RQ01113 521 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 NIPAL4Q0D2K0 466 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ELAVL2Q12926 359 aaKnown RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 GPR17Q13304 367 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 OLIG2Q13516 323 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ITIH4Q14624 930 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 TEX44Q53QW1 395 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 TTC39BQ5VTQ0 682 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 KCTD11Q693B1 232 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 CGB2Q6NT52 195 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 RNF19BQ6ZMZ0 732 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ARHGAP36Q6ZRI8 547 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 RGS9BPQ6ZS82 235 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 SH2D5Q6ZV89 423 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 MARK2Q7KZI7 788 aaKnown RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 CTAGE3PQ8IX95 158 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 LRRC43Q8N309 656 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ARHGAP18Q8N392 663 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 FBXO32Q969P5 355 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ALKBH8Q96BT7 664 aaKnown RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 OXNAD1Q96HP4 312 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 APOPT1Q96IL0 206 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 SERAC1Q96JX3 654 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 TGS1Q96RS0 853 aaKnown RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 ELAC2Q9BQ52 826 aaKnown RBP11.8□□□□□ -0.52
RAB5C-208ENST00000551338 HIPK3Q9H422 1215 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 CASS4Q9NQ75 786 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 HS3ST4Q9Y661 456 aa11.8□□□□□ -0.52
RAB5C-208ENST00000551338 SDR42E2A6NKP2 422 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 WASH4PA8MWX3 477 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 E9PAM4 449 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 GOLGA8RI6L899 631 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 SNX3O60493 162 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ALDH1A2O94788 518 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 RTN3O95197 1032 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ZWINTO95229 277 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 EFEMP2O95967 443 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 MOCS2O96007 188 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 SRGAP2BP0DMP2 458 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ALADP13716 330 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 PGAM1P18669 254 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 YWHAQP27348 245 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 TBX4P57082 545 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 SESN2P58004 480 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 CRADDP78560 199 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 COG7P83436 770 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ZNF33AQ06730 810 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 IFT88Q13099 833 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ZKSCAN8Q15776 578 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 PDK4Q16654 411 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 PIK3R6Q5UE93 754 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 AFMIDQ63HM1 303 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 NUGGCQ68CJ6 796 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ITPRIPL1Q6GPH6 555 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 RWDD4Q6NW29 188 aaKnown RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 LVRNQ6Q4G3 990 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 PRSS55Q6UWB4 352 aaPredicted RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 SLC39A5Q6ZMH5 540 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 TAS1R1Q7RTX1 841 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ANKRD33Q7Z3H0 272 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 YTHDF3Q7Z739 585 aaKnown RBP11.79□□□□□ -0.52
RAB5C-208ENST00000551338 LRRC6Q86X45 466 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 ZNF683Q8IZ20 524 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 OR52K1Q8NGK4 314 aa11.79□□□□□ -0.52
RAB5C-208ENST00000551338 TCP10LQ8TDR4 215 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms