RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 IQCDQ96DY2 449 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 LOXL4Q96JB6 756 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 FAM81BQ96LP2 452 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ZNF560Q96MR9 790 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 ZNF558Q96NG5 402 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 FAM193BQ96PV7 902 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 COLEC11Q9BWP8 271 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 IMPG2Q9BZV3 1241 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 CWH43Q9H720 699 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 BARX1Q9HBU1 254 aaPredicted RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 GDAP2Q9NXN4 497 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TUBGCP4Q9UGJ1 667 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 SIX4Q9UIU6 781 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 MSRAQ9UJ68 235 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 MRPL42Q9Y6G3 142 aaKnown RBP6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TET1Q8NFU7 2136 aa6.13□□□□□ -1.43
SCAF11-213ENST00000550629 TCRBV16S1A1N1A0A5B0 115 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 FSD2A1L4K1 749 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 LINC01553A4QN01 128 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 C5orf67F2Z3F1 127 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 PODXLO00592 558 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CLASP2O75122 1294 aaKnown RBP6.12□□□□□ -1.43
SCAF11-213ENST00000550629 SF3B1O75533 1304 aaKnown RBP eCLIP6.12□□□□□ -1.43
SCAF11-213ENST00000550629 DDHD2O94830 711 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 VNN1O95497 513 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 ASS1P00966 412 aaKnown RBP6.12□□□□□ -1.43
SCAF11-213ENST00000550629 RB1P06400 928 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 GALTP07902 379 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 LINC00271P0C7V0 271 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 P4HA1P13674 534 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 PIK3CAP42336 1068 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 RANBP2P49792 3224 aaKnown RBP6.12□□□□□ -1.43
SCAF11-213ENST00000550629 TAF6P49848 677 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 GATMP50440 423 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CLCNKBP51801 687 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 BCAR1P56945 870 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 LILRA4P59901 499 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 SQSTM1Q13501 440 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 EXOC3L4Q17RC7 722 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CBWD6Q4V339 395 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 EPC2Q52LR7 807 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 HSP90AA4PQ58FG1 418 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CBWD3Q5JTY5 395 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CBWD5Q5RIA9 395 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CPZQ66K79 652 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 ABHD17CQ6PCB6 329 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 GBP6Q6ZN66 633 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 ENOSF1Q7L5Y1 443 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 OVCH1Q7RTY7 1134 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 LIMS2Q7Z4I7 341 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 TMCO2Q7Z6W1 182 aaPredicted RBP6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CREBRFQ8IUR6 639 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 TAS1R2Q8TE23 839 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 HPDLQ96IR7 371 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 ERGIC2Q96RQ1 377 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 VPS16Q9H269 839 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CXCL16Q9H2A7 254 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 NRDE2Q9H7Z3 1164 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 TRIM39Q9HCM9 518 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 PLCB1Q9NQ66 1216 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 RAB20Q9NX57 234 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 MIOSQ9NXC5 875 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 TAB2Q9NYJ8 693 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 SPG21Q9NZD8 308 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 FBXL5Q9UKA1 691 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 ADAM29Q9UKF5 820 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 AGAP1Q9UPQ3 857 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 LZTS1Q9Y250 596 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 CHD9Q3L8U1 2897 aa6.12□□□□□ -1.43
SCAF11-213ENST00000550629 GOLGA6L3A6NEY3 463 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 PRAMEF25A6NGN4 478 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 CASTOR2A6NHX0 329 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 KPNA7A9QM74 516 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 H0Y858 1186 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 M0QZQ0 153 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 PES1O00541 588 aaKnown RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 NRP1O14786 923 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 PLD2O14939 933 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 SYN3O14994 580 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 LAMTOR5O43504 91 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 AKAP8O43823 692 aaKnown RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 HUS1O60921 280 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 TADA2AO75478 443 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 B3GAT3O94766 335 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 HLA-DRAP01903 254 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 CA3P07451 260 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 KRT19P08727 400 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 IBSPP21815 317 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 TBXAS1P24557 533 aaPredicted RBP6.11□□□□□ -1.43
SCAF11-213ENST00000550629 PON1P27169 355 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 BMPR1AP36894 532 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 OR1G1P47890 313 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 SLC11A1P49279 550 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 UBASH3AP57075 661 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 MYL6P60660 151 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 ERVK-21P61565 698 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 GCNT1Q02742 428 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 CREMQ03060 361 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 UBXN1Q04323 297 aa6.11□□□□□ -1.43
SCAF11-213ENST00000550629 KRT17Q04695 432 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms