RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 C6orf118Q5T5N4 469 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 RFWD3Q6PCD5 774 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 ZNF557Q8N988 423 aaPredicted RBP17.88■□□□□ 0.45
LETMD1-220ENST00000549686 TDRD5Q8NAT2 981 aaKnown RBP17.88■□□□□ 0.45
LETMD1-220ENST00000549686 NOA1Q8NC60 698 aaKnown RBP17.88■□□□□ 0.45
LETMD1-220ENST00000549686 MYRIPQ8NFW9 859 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 ATG4AQ8WYN0 398 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 SUSD6Q92537 303 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 TMA16Q96EY4 203 aaKnown RBP17.88■□□□□ 0.45
LETMD1-220ENST00000549686 PRICKLE1Q96MT3 831 aaPredicted RBP17.88■□□□□ 0.45
LETMD1-220ENST00000549686 THG1LQ9NWX6 298 aaKnown RBP17.88■□□□□ 0.45
LETMD1-220ENST00000549686 MPP6Q9NZW5 540 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 DNPEPQ9ULA0 475 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 ZNF148Q9UQR1 794 aa17.88■□□□□ 0.45
LETMD1-220ENST00000549686 H7C0C1 242 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 ECEL1O95672 775 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 FOSL2P15408 326 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 ETFBP38117 255 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 ATP5OP48047 213 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 OXCT1P55809 520 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 YBEYP58557 167 aaPredicted RBP17.87■□□□□ 0.45
LETMD1-220ENST00000549686 DR1Q01658 176 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 GALNT2Q10471 571 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 SNX1Q13596 522 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 PARP15Q460N3 678 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 ALFQ53S48 1182 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 AFMIDQ63HM1 303 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 NPNTQ6UXI9 565 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 ZNF783Q6ZMS7 281 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 OTOP3Q7RTS5 596 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 SETD3Q86TU7 594 aaPredicted RBP17.87■□□□□ 0.45
LETMD1-220ENST00000549686 CCDC117Q8IWD4 279 aaPredicted RBP17.87■□□□□ 0.45
LETMD1-220ENST00000549686 CCHCR1Q8TD31 782 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 BPIFB1Q8TDL5 484 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 TFB1MQ8WVM0 346 aaKnown RBP17.87■□□□□ 0.45
LETMD1-220ENST00000549686 MYLIPQ8WY64 445 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 UBE2ZQ9H832 354 aaPredicted RBP17.87■□□□□ 0.45
LETMD1-220ENST00000549686 ZFP14Q9HCL3 533 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 SAE1Q9UBE0 346 aaPredicted RBP17.87■□□□□ 0.45
LETMD1-220ENST00000549686 ZNF212Q9UDV6 495 aa17.87■□□□□ 0.45
LETMD1-220ENST00000549686 CDH23Q9H251 3354 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 BCLAF3A2AJT9 711 aaKnown RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 ARHGAP42A6NI28 874 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 MTSS1O43312 755 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 RAMP2O60895 175 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 CNTN5O94779 1100 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 OR1E1P30953 314 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 GBP2P32456 591 aaPredicted RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 RPS24P62847 133 aaKnown RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 SLC10A2Q12908 348 aaPredicted RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 ZNF177Q13360 481 aaPredicted RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 SMAD4Q13485 552 aaKnown RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 SLC45A4Q5BKX6 768 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 HABP4Q5JVS0 413 aaKnown RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 TEX35Q5T0J7 233 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 TTC27Q6P3X3 843 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 DARS2Q6PI48 645 aaKnown RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 POTEHQ6S545 545 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 TFAP2DQ7Z6R9 452 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 NPWQ8N729 165 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 LRRN4CLQ8ND94 238 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 TTC16Q8NEE8 873 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 RUBCNQ92622 972 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 HDAC11Q96DB2 347 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 CCDC114Q96M63 670 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 QKIQ96PU8 341 aaKnown RBP eCLIP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 KLC2Q9H0B6 622 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 POMKQ9H5K3 350 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 AMACRQ9UHK6 382 aa17.86■□□□□ 0.45
LETMD1-220ENST00000549686 USP15Q9Y4E8 981 aaPredicted RBP17.86■□□□□ 0.45
LETMD1-220ENST00000549686 TARSL2A2RTX5 802 aaKnown RBP17.85■□□□□ 0.45
LETMD1-220ENST00000549686 TSPAN3O60637 253 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 TUBBP07437 444 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 LAMP2P13473 410 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 IFNAR2P48551 515 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 TERF1P54274 439 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 PDGFRLQ15198 375 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 RNF43Q68DV7 783 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 MTSS1LQ765P7 747 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 GSTA5Q7RTV2 222 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 ZC3H18Q86VM9 953 aaKnown RBP17.85■□□□□ 0.45
LETMD1-220ENST00000549686 DEFB123Q8N688 67 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 ALLCQ8N6M5 410 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 DDI1Q8WTU0 396 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 OSCP1Q8WVF1 389 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 RSAD2Q8WXG1 361 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 ELSPBP1Q96BH3 223 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 TSGA13Q96PP4 275 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 MYADMQ96S97 322 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 RAB17Q9H0T7 212 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 MAGEH1Q9H213 219 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 MARK1Q9P0L2 795 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 EPS15L1Q9UBC2 864 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 CDH22Q9UJ99 828 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 TBC1D30Q9Y2I9 924 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 MFHAS1Q9Y4C4 1052 aa17.85■□□□□ 0.45
LETMD1-220ENST00000549686 ILVBLA1L0T0 632 aa17.84■□□□□ 0.45
LETMD1-220ENST00000549686 HEPACAM2A8MVW5 462 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms