RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 RNF43Q68DV7 783 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 NADSYN1Q6IA69 706 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 NYAP1Q6ZVC0 841 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 RALGPS2Q86X27 583 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 RFX6Q8HWS3 928 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 MFN1Q8IWA4 741 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC44A3Q8N4M1 653 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TSC1Q92574 1164 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 C16orf45Q96MC5 204 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 RNF157Q96PX1 679 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TLR10Q9BXR5 811 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 MFRPQ9BY79 579 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 OSBPL8Q9BZF1 889 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 MAGEH1Q9H213 219 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 GOLPH3Q9H4A6 298 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 CWC15Q9P013 229 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 DNAI1Q9UI46 699 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TTC7AQ9ULT0 858 aaPredicted RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 HPCAL4Q9UM19 191 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 DUSP12Q9UNI6 340 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 MRPS17Q9Y2R5 130 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 SAR1BQ9Y6B6 198 aa10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 SPTBN5Q9NRC6 3674 aaKnown RBP10.05□□□□□ -0.8
SMARCD1-206ENST00000549274 TICRRQ7Z2Z1 1910 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 MYOFQ9NZM1 2061 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 hCG_1818297A0A087WSY0 165 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 ARHGAP42A6NI28 874 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 NEDD8-MDP1E9PL57 170 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 PPP1R12AO14974 1030 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 NPC1O15118 1278 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 MTSS1O43312 755 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 TIMM44O43615 452 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 RAMP2O60895 175 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 ASLP04424 464 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 CYP17A1P05093 508 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 RHOCP08134 193 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 GOT1P17174 413 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 ERCC2P18074 760 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 SP100P23497 879 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 HOXD9P28356 352 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC6A4P31645 630 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 CDKN2BP42772 138 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 PRKCQQ04759 706 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 CKAP4Q07065 602 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 DPYSQ14117 519 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 GRM2Q14416 872 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 PAFAH1B3Q15102 231 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 ANKRD20A8PQ5CZ79 823 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 DAB2IPQ5VWQ8 1189 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 TIGD7Q6NT04 549 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 SYT10Q6XYQ8 523 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 TPGS1Q6ZTW0 290 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 BBS12Q6ZW61 710 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 ZNF683Q8IZ20 524 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 UMODL1-AS1Q8N2C9 162 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 FIBINQ8TAL6 211 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 NSMCE1Q8WV22 266 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 UCMAQ8WVF2 138 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 RAPGEF5Q92565 580 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 KRT35Q92764 455 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 RSPRY1Q96DX4 576 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 C2orf49Q9BVC5 232 aaPredicted RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 ARHGEF4Q9NR80 690 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 GPATCH2LQ9NWQ4 482 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 DEC1Q9P2X7 70 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 XPO7Q9UIA9 1087 aaKnown RBP10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC8A2Q9UPR5 921 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 TBC1D30Q9Y2I9 924 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC27A6Q9Y2P4 619 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 COL6A3P12111 3177 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 CHD5Q8TDI0 1954 aa10.04□□□□□ -0.8
SMARCD1-206ENST00000549274 KIAA1549LQ6ZVL6 1849 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 HACD1B0YJ81 288 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 APOC4-APOC2K7ER74 178 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PGRMC1O00264 195 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 ARNTLO00327 626 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 DCLK1O15075 740 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 TSPAN3O60637 253 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 APOC2P02655 101 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 APODP05090 189 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 ATP5BP06576 529 aaKnown RBP10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 BMP1P13497 986 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 TCF4P15884 667 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 DRD1P21728 446 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 NNMTP40261 264 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 DGKGP49619 791 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 LMNB2Q03252 620 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC20A2Q08357 652 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 XRCC4Q13426 336 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 POLD3Q15054 466 aaPredicted RBP10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 PDK1Q15118 436 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 CA9Q16790 459 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 FBXO43Q4G163 708 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 RAB6CQ53S08 254 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 FYB2Q5VWT5 728 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 SLC9A4Q6AI14 798 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 TXNRD3NBQ6F5E7 133 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 GRAMD4Q6IC98 578 aa10.03□□□□□ -0.8
SMARCD1-206ENST00000549274 RFWD3Q6PCD5 774 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms