RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 PARP14Q460N5 1801 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 MYO18AQ92614 2054 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 NEMP1O14524 444 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 STRNO43815 780 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PFDN1O60925 122 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PFKMP08237 780 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 UBA1P22314 1058 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PROZP22891 400 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 APOFQ13790 326 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 INSCQ1MX18 579 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 OLFML1Q6UWY5 402 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CATSPERGQ6ZRH7 1159 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 GALNT4Q8N4A0 578 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 C12orf29Q8N999 325 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 ADAM32Q8TC27 787 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 MOCOSQ96EN8 888 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CDRT15Q96T59 188 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 CEP41Q9BYV8 373 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 DHX35Q9H5Z1 703 aaKnown RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 WDR55Q9H6Y2 383 aaPredicted RBP14.06□□□□□ -0.16
HDAC7-228ENST00000548938 PTPRHQ9HD43 1115 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 TCF7L2Q9NQB0 619 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 NRBP2Q9NSY0 501 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 AK5Q9Y6K8 562 aa14.06□□□□□ -0.16
HDAC7-228ENST00000548938 A0A0J9YVX5 310 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 MDM4O15151 490 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 DGKIO75912 1065 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 AMHP03971 560 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 GLDCP23378 1020 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 SLC5A2P31639 672 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 MLH1P40692 756 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 STAT5BP51692 787 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 BNC2Q6ZN30 1099 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-228ENST00000548938 DSELQ8IZU8 1212 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 USP13Q92995 863 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-228ENST00000548938 DCPSQ96C86 337 aaKnown RBP14.05□□□□□ -0.16
HDAC7-228ENST00000548938 PHF12Q96QT6 1004 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 TBCBQ99426 244 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 ACAD9Q9H845 621 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 SYBUQ9NX95 663 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 PLK2Q9NYY3 685 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 PRPF19Q9UMS4 504 aaKnown RBP14.05□□□□□ -0.16
HDAC7-228ENST00000548938 RLFQ13129 1914 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 PHIPQ8WWQ0 1821 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 BTBD19C9JJ37 291 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 DPYSL4O14531 572 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 PGAM1P18669 254 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 NDST1P52848 882 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 MS4A2Q01362 244 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 ZNF423Q2M1K9 1284 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 JADE1Q6IE81 842 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 TSHZ1Q6ZSZ6 1077 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 SULF1Q8IWU6 871 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 DCLK2Q8N568 766 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 TDRD5Q8NAT2 981 aaKnown RBP14.05□□□□□ -0.16
HDAC7-228ENST00000548938 KYQ8NBH2 561 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 BHLHE22Q8NFJ8 381 aaPredicted RBP14.05□□□□□ -0.16
HDAC7-228ENST00000548938 PKP2Q99959 881 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 CDT1Q9H211 546 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 RPF1Q9H9Y2 349 aaKnown RBP14.05□□□□□ -0.16
HDAC7-228ENST00000548938 DTLQ9NZJ0 730 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 TXNDC16Q9P2K2 825 aa14.05□□□□□ -0.16
HDAC7-228ENST00000548938 INO80B-WBP1J3KQ70 363 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 CFLARO15519 480 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 TRPA1O75762 1119 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 FAM58BPP0C7Q3 252 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 ABCG1P45844 678 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 NUMBP49757 651 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 GTF2A2P52657 109 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 CEACAM7Q14002 265 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 STXBP2Q15833 593 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 GOLGA7BQ2TAP0 167 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 PIGGQ5H8A4 983 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 PMF1Q6P1K2 205 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 KLC3Q6P597 504 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 AMIGO2Q86SJ2 522 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 TRIM74Q86UV6 250 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 TRIM73Q86UV7 250 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 KBTBD7Q8WVZ9 684 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 KHSRPQ92945 711 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC7-228ENST00000548938 RCN3Q96D15 328 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 INO80BQ9C086 356 aaPredicted RBP14.04□□□□□ -0.16
HDAC7-228ENST00000548938 MORF4L1Q9UBU8 362 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 SPDYE16A6NNV3 312 aaPredicted RBP14.04□□□□□ -0.16
HDAC7-228ENST00000548938 LACTBL1A8MY62 500 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 FARP2O94887 1054 aaPredicted RBP14.04□□□□□ -0.16
HDAC7-228ENST00000548938 LTFP02788 710 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 CHRNGP07510 517 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 THRAP10827 490 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 MPSTP25325 297 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 IRF9Q00978 393 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 HSP90AA5PQ58FG0 334 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 IER5Q5VY09 327 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 LRRC8BQ6P9F7 803 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 C16orf89Q6UX73 402 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 TRIM50Q86XT4 487 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 SCUBE3Q8IX30 993 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 COLGALT1Q8NBJ5 622 aa14.04□□□□□ -0.16
HDAC7-228ENST00000548938 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms