RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GRIA4P48058 902 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 CSNK1EP49674 416 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 CST6Q15828 149 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 EXOC3L4Q17RC7 722 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 KIF19Q2TAC6 998 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 LAYNQ6UX15 382 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 CIR1Q86X95 450 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 CCDC117Q8IWD4 279 aaPredicted RBP17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 APCDD1Q8J025 514 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 CHCHD4Q8N4Q1 142 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 ZCCHC14Q8WYQ9 949 aaKnown RBP17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 TM7SF3Q9NS93 570 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 ASNSD1Q9NWL6 643 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 SCML1Q9UN30 329 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 PLXNB3Q9ULL4 1909 aa17.98■□□□□ 0.47
CHMP1A-205ENST00000548650 FAM221BA6H8Z2 402 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 KCNU1A8MYU2 1149 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 C10orf142B7Z368 130 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 F5H5T6 163 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 MID1O15344 667 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 HSF2BPO75031 334 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 FSBPO95073 299 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 MOCS3O95396 460 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 GLI1P08151 1106 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 CD27P26842 260 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 C9orf64Q5T6V5 341 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 OLFML1Q6UWY5 402 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 FAM183BPQ6ZVS7 135 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 GLRX5Q86SX6 157 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 CREBRFQ8IUR6 639 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 DEFB106AQ8N104 65 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 ATP6V0D2Q8N8Y2 350 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 C1orf131Q8NDD1 294 aaKnown RBP17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 PPP1R13BQ96KQ4 1090 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 DDIT4Q9NX09 232 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 KIAA1522Q9P206 1035 aaPredicted RBP17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 PCDHB9Q9Y5E1 797 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 SNX11Q9Y5W9 270 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 ZFYVE26Q68DK2 2539 aa17.97■□□□□ 0.47
CHMP1A-205ENST00000548650 EDDM13A0A1B0GTR0 161 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 A0A1B0GVM2 712 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 TARSL2A2RTX5 802 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 TCAF2A6NFQ2 919 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 ERBB2P04626 1255 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 PNMA6AP0CW24 399 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 STK19P49842 368 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 CDK17Q00537 523 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 ECT2LQ008S8 904 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 TEAD4Q15561 434 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 PTPN20Q4JDL3 420 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 OTUD1Q5VV17 481 aaPredicted RBP17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 KIAA0895LQ68EN5 471 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 SMYD5Q6GMV2 418 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 CXorf57Q6NSI4 855 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 CCAR2Q8N163 923 aaKnown RBP17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 MLKLQ8NB16 471 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 ADAMTS14Q8WXS8 1223 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 FBXL12Q9NXK8 326 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 ADAMTS1Q9UHI8 967 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 SLCO3A1Q9UIG8 710 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 CEP83Q9Y592 693 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 PCDHGB2Q9Y5G2 931 aa17.96■□□□□ 0.47
CHMP1A-205ENST00000548650 SYNJ2BP-COX16A0A087WUM0 186 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 A0A1W2PP55 124 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 FLRT2O43155 660 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 RNASEH1O60930 286 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 DAB1O75553 588 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 GRAP2O75791 330 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC2A3P11169 496 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 PDGFRAP16234 1089 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 RDXP35241 583 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 MTIF2P46199 727 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 PSMD8P48556 350 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 NUMBP49757 651 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 IRAK1P51617 712 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 CENPCQ03188 943 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 EFHC1Q5JVL4 640 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 TTC39BQ5VTQ0 682 aaPredicted RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 DBX2Q6ZNG2 339 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 MMAAQ8IVH4 418 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 AADATQ8N5Z0 425 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 PNPLA1Q8N8W4 532 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 SETD7Q8WTS6 366 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 RPL10LQ96L21 214 aaKnown RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 COX16Q9P0S2 106 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 FZD4Q9ULV1 537 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 NCKAP1Q9Y2A7 1128 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 ANKRD6Q9Y2G4 727 aa17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 ANKRD11Q6UB99 2663 aaPredicted RBP17.95■□□□□ 0.46
CHMP1A-205ENST00000548650 RNASEH2AO75792 299 aaKnown RBP17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 ABCB4P21439 1286 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 MZF1P28698 734 aaPredicted RBP17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 CCR1P32246 355 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 CTSKP43235 329 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 GALCP54803 685 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 PTK2Q05397 1052 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 SLC12A1Q13621 1099 aa17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 ELAVL3Q14576 367 aaKnown RBP17.94■□□□□ 0.46
CHMP1A-205ENST00000548650 MAN2A1Q16706 1144 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms