RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 PDE1BQ01064 536 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 UPP1Q16831 310 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 TIGD5Q53EQ6 642 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 GNASQ5JWF2 1037 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 GDF6Q6KF10 455 aaPredicted RBP15.91■□□□□ 0.14
BRF1-212ENST00000547562 C16orf46Q6P387 395 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 CES3Q6UWW8 571 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 ZCCHC23Q6ZST2 131 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 EDEM1Q92611 657 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 HDAC11Q96DB2 347 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 PAAF1Q9BRP4 392 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 RHOBTB2Q9BYZ6 727 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 BRD8Q9H0E9 1235 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 DENND2DQ9H6A0 471 aaPredicted RBP15.91■□□□□ 0.14
BRF1-212ENST00000547562 LRRC40Q9H9A6 602 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 CSNK1G1Q9HCP0 422 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 TXNDC16Q9P2K2 825 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 NKX1-2Q9UD57 310 aaPredicted RBP15.91■□□□□ 0.14
BRF1-212ENST00000547562 MARCOQ9UEW3 520 aaPredicted RBP15.91■□□□□ 0.14
BRF1-212ENST00000547562 DCDC2Q9UHG0 476 aa15.91■□□□□ 0.14
BRF1-212ENST00000547562 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.91■□□□□ 0.14
BRF1-212ENST00000547562 ZBTB24O43167 697 aaPredicted RBP15.9■□□□□ 0.14
BRF1-212ENST00000547562 MTSS1O43312 755 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 DIAPH2O60879 1101 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 KITP10721 976 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 ESRRAP11474 423 aaPredicted RBP15.9■□□□□ 0.14
BRF1-212ENST00000547562 MX2P20592 715 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 GP5P40197 560 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 CXCR3P49682 368 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 CXCL17Q6UXB2 119 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 GIMAP7Q8NHV1 300 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 FCRL3Q96P31 734 aaPredicted RBP15.9■□□□□ 0.14
BRF1-212ENST00000547562 EPAS1Q99814 870 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 WDCPQ9H6R7 721 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 ARMCX1Q9P291 453 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 VANGL2Q9ULK5 521 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 COL4A4P53420 1690 aaPredicted RBP15.9■□□□□ 0.14
BRF1-212ENST00000547562 ERI2A8K979 691 aaKnown RBP15.9■□□□□ 0.14
BRF1-212ENST00000547562 GYG2O15488 501 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 GSC2O15499 205 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 PLIN3O60664 434 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 USP12O75317 370 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 ZNF135P52742 658 aaPredicted RBP15.9■□□□□ 0.14
BRF1-212ENST00000547562 AQP5P55064 265 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 GALNT2Q10471 571 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 SMAD1Q15797 465 aaKnown RBP15.9■□□□□ 0.14
BRF1-212ENST00000547562 MBLAC2Q68D91 279 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 KCTD11Q693B1 232 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 TRPV1Q8NER1 839 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 PPP1R14CQ8TAE6 165 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 SH3TC2Q8TF17 1288 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 MYLPFQ96A32 169 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 CPNE1Q99829 537 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 RTP3Q9BQQ7 232 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 TKTL2Q9H0I9 626 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 GBA3Q9H227 469 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 CASS4Q9NQ75 786 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 BFARQ9NZS9 450 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 OR12D3Q9UGF7 316 aa15.9■□□□□ 0.14
BRF1-212ENST00000547562 MANSC4A6NHS7 340 aaPredicted RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 CAPN14A8MX76 684 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 TNPO2O14787 897 aaKnown RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 CD68P34810 354 aaPredicted RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 SERPINB6P35237 376 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 GARSP41250 739 aaKnown RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 CCNG1P51959 295 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 GRTP1Q5TC63 336 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 RINLQ6ZS11 566 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 TMEM135Q86UB9 458 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 RASAL3Q86YV0 1011 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 IRGQQ8WZA9 623 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 PGLYRP2Q96PD5 576 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 NUDCD1Q96RS6 583 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 TAS2R1Q9NYW7 299 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 TRHDEQ9UKU6 1024 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 SNX10Q9Y5X0 201 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 PTPRDP23468 1912 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 RPSAP08865 295 aaKnown RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 FGF3P11487 239 aaPredicted RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 ODC1P11926 461 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 RPL10AP62906 217 aaKnown RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 ZBTB17Q13105 803 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 INSCQ1MX18 579 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 PM20D1Q6GTS8 502 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 C4orf50Q6ZRC1 276 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 MRPL10Q7Z7H8 261 aaKnown RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 SERINC5Q86VE9 423 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 ENDOVQ8N8Q3 282 aaKnown RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 DNAAF3Q8N9W5 541 aa15.89■□□□□ 0.13
BRF1-212ENST00000547562 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.89■□□□□ 0.13
BRF1-212ENST00000547562 ZNF669Q96BR6 464 aaPredicted RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 PPARGC1AQ9UBK2 798 aaKnown RBP15.89■□□□□ 0.13
BRF1-212ENST00000547562 GPR182O15218 404 aa15.88■□□□□ 0.13
BRF1-212ENST00000547562 ENTPD5O75356 428 aa15.88■□□□□ 0.13
BRF1-212ENST00000547562 USP1O94782 785 aa15.88■□□□□ 0.13
BRF1-212ENST00000547562 LRIG2O94898 1065 aa15.88■□□□□ 0.13
BRF1-212ENST00000547562 ATP5BP06576 529 aaKnown RBP15.88■□□□□ 0.13
BRF1-212ENST00000547562 TYK2P29597 1187 aa15.88■□□□□ 0.13
BRF1-212ENST00000547562 FRG1Q14331 258 aaKnown RBP15.88■□□□□ 0.13
BRF1-212ENST00000547562 PCLAFQ15004 111 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 277.9 ms