RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 TNRC6BQ9UPQ9 1833 aaKnown RBP16.74■□□□□ 0.27
CDK4-204ENST00000547281 SMTNL1A8MU46 457 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 LGALS16A8MUM7 142 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 KCNU1A8MYU2 1149 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 SH3BP5O60239 455 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 GRAP2O75791 330 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 KRT37O76014 449 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 SEMA4FO95754 770 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 GLI1P08151 1106 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 ATP1A3P13637 1013 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 CD59P13987 128 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 ZNF18P17022 549 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 PTMSP20962 102 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 CCR1P32246 355 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 PITX1P78337 314 aaPredicted RBP16.73■□□□□ 0.27
CDK4-204ENST00000547281 ECT2LQ008S8 904 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 SFSWAPQ12872 951 aaKnown RBP16.73■□□□□ 0.27
CDK4-204ENST00000547281 HNRNPDQ14103 355 aaKnown RBP16.73■□□□□ 0.27
CDK4-204ENST00000547281 SYCP1Q15431 976 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 PITRM1Q5JRX3 1037 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
CDK4-204ENST00000547281 NAA15Q9BXJ9 866 aaKnown RBP16.73■□□□□ 0.27
CDK4-204ENST00000547281 HSD3B7Q9H2F3 369 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 PLCB1Q9NQ66 1216 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 PCDHGC3Q9UN70 934 aa16.73■□□□□ 0.27
CDK4-204ENST00000547281 CACNA1BQ00975 2339 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 FAM170AA1A519 330 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 HSF2BPO75031 334 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 SIN3BO75182 1162 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 FSBPO95073 299 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 TOP3BO95985 862 aaKnown RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 SRPRAP08240 638 aaKnown RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 NNMTP40261 264 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 CTSOP43234 321 aaPredicted RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 CSNK1EP49674 416 aaKnown RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 ZNF165P49910 485 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 HNRNPA1L2Q32P51 320 aaKnown RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 RABGAP1LQ5R372 815 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 TAF3Q5VWG9 929 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 IL27RAQ6UWB1 636 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 LRSAM1Q6UWE0 723 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 C1orf131Q8NDD1 294 aaKnown RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 CAMK1GQ96NX5 476 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 BPIFA3Q9BQP9 254 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 SCNM1Q9BWG6 230 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 STK33Q9BYT3 514 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 RSPH9Q9H1X1 276 aaPredicted RBP16.72■□□□□ 0.27
CDK4-204ENST00000547281 GANQ9H2C0 597 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 GAREM1Q9H706 876 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 SGK2Q9HBY8 427 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 NLRC4Q9NPP4 1024 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 ASNSD1Q9NWL6 643 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 ADAMTS9Q9P2N4 1935 aa16.72■□□□□ 0.27
CDK4-204ENST00000547281 FAM47DPA6NHR8 397 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 TTC34A8MYJ7 566 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 F8VZ95 297 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 EPHB6O15197 1021 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 IGLV3-25P01717 112 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 CYP11B1P15538 503 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 MATKP42679 507 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 AFF3P51826 1226 aaKnown RBP16.71■□□□□ 0.27
CDK4-204ENST00000547281 NME3Q13232 169 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 TEAD4Q15561 434 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 TRIP6Q15654 476 aaKnown RBP16.71■□□□□ 0.27
CDK4-204ENST00000547281 FAM183BPQ6ZVS7 135 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 APCDD1Q8J025 514 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 KDM1BQ8NB78 822 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 SETD7Q8WTS6 366 aaKnown RBP16.71■□□□□ 0.27
CDK4-204ENST00000547281 MYO19Q96H55 970 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 RPL10LQ96L21 214 aaKnown RBP16.71■□□□□ 0.27
CDK4-204ENST00000547281 MRGPRX3Q96LB0 322 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 SLC2A13Q96QE2 648 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 OMDQ99983 421 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 FBXL12Q9NXK8 326 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 SLCO3A1Q9UIG8 710 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 SCML1Q9UN30 329 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 SIK3Q9Y2K2 1263 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.71■□□□□ 0.27
CDK4-204ENST00000547281 CEP295Q9C0D2 2601 aa16.71■□□□□ 0.27
CDK4-204ENST00000547281 EDDM13A0A1B0GTR0 161 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 A0A1B0GVT2 93 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 TARSL2A2RTX5 802 aaKnown RBP16.7■□□□□ 0.26
CDK4-204ENST00000547281 LRRC10BA6NIK2 292 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 HYAL3O43820 417 aaPredicted RBP16.7■□□□□ 0.26
CDK4-204ENST00000547281 GJB3O75712 270 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 GFPT2O94808 682 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 CER1O95813 267 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 ERBB2P04626 1255 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 PDGFRAP16234 1089 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 NUMBP49757 651 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 RNASE9P60153 205 aaKnown RBP16.7■□□□□ 0.26
CDK4-204ENST00000547281 FAM193AP78312 1265 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 SLC6A3Q01959 620 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 SLC12A1Q13621 1099 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 HLA-BQ31612 363 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 C9orf64Q5T6V5 341 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 TTC39BQ5VTQ0 682 aaPredicted RBP16.7■□□□□ 0.26
CDK4-204ENST00000547281 SMYD5Q6GMV2 418 aa16.7■□□□□ 0.26
CDK4-204ENST00000547281 USP30Q70CQ3 517 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms