RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ADH1CP00326 375 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 APODP05090 189 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 PROS1P07225 676 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 HMBSP08397 361 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 IRF1P10914 325 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 TFE3P19532 575 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-226ENST00000547259 CSRP1P21291 193 aaKnown RBP12.5□□□□□ -0.41
HDAC7-226ENST00000547259 RDXP35241 583 aaKnown RBP12.5□□□□□ -0.41
HDAC7-226ENST00000547259 NOVA1P51513 510 aaKnown RBP12.5□□□□□ -0.41
HDAC7-226ENST00000547259 CRY1Q16526 586 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 EOGTQ5NDL2 527 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 OTUD1Q5VV17 481 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-226ENST00000547259 C11orf63Q6NUN7 778 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 STRADAQ7RTN6 431 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 DAAM2Q86T65 1068 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 ADGRG2Q8IZP9 1017 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 RNF10Q8N5U6 811 aaKnown RBP12.5□□□□□ -0.41
HDAC7-226ENST00000547259 NIPA2Q8N8Q9 360 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 TPCN2Q8NHX9 752 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 RIN3Q8TB24 985 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 KIAA1524Q8TCG1 905 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 RNF34Q969K3 372 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 NT5C3BQ969T7 300 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 OTUB2Q96DC9 234 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 ALS2CR12Q96Q35 445 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 PNKPQ96T60 521 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 RNF38Q9H0F5 515 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 RXFP3Q9NSD7 469 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 SMPD4Q9NXE4 827 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 EVLQ9UI08 416 aaPredicted RBP12.5□□□□□ -0.41
HDAC7-226ENST00000547259 CPQQ9Y646 472 aa12.5□□□□□ -0.41
HDAC7-226ENST00000547259 IGF2RP11717 2491 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 ATRXP46100 2492 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 LNP1A1A4G5 178 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 TMEM8BA6NDV4 472 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 K7EQS6 105 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 ZBTB24O43167 697 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 MAP3K13O43283 966 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 BUB1BO60566 1050 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 F9P00740 461 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 IGLV3-25P01717 112 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 MAN1A1P33908 653 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 HOXD12P35452 270 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 SSR1P43307 286 aaKnown RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 TNFRSF4P43489 277 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 TBX4P57082 545 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 NNTQ13423 1086 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 ACAP1Q15027 740 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 TRIP4Q15650 581 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 C2orf27AQ580R0 203 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 SH3PXD2AQ5TCZ1 1133 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 ANO7Q6IWH7 933 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 LPCAT2Q7L5N7 544 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 TRMT11Q7Z4G4 463 aaKnown RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 SYCE1Q8N0S2 351 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 C17orf53Q8N3J3 647 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 PGAP3Q96FM1 320 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 NCAPGQ9BPX3 1015 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 KLF16Q9BXK1 252 aaPredicted RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 NUSAP1Q9BXS6 441 aaKnown RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 LINC00597Q9H2U6 94 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 SLC32A1Q9H598 525 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 PIGVQ9NUD9 493 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 TLR6Q9Y2C9 796 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 HBS1LQ9Y450 684 aaKnown RBP12.49□□□□□ -0.41
HDAC7-226ENST00000547259 CAPN6Q9Y6Q1 641 aa12.49□□□□□ -0.41
HDAC7-226ENST00000547259 A0A0A0MRY4 1105 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 E2F8A0AVK6 867 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 GRID2IPA4D2P6 1211 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 DCLK1O15075 740 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 SPOPO43791 374 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 LRCH4O75427 683 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 ENDOD1O94919 500 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 APOEP02649 317 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 HOXC13P31276 330 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 OPRD1P41143 372 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 GRIA2P42262 883 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 DHPSP49366 369 aaPredicted RBP12.48□□□□□ -0.41
HDAC7-226ENST00000547259 HDAC4P56524 1084 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 COG7P83436 770 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 DHCR24Q15392 516 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 RAB6CQ53S08 254 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 SCYL2Q6P3W7 929 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 BNIPLQ7Z465 357 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 FAM131BQ86XD5 332 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 CENPIQ92674 756 aaPredicted RBP12.48□□□□□ -0.41
HDAC7-226ENST00000547259 EZH1Q92800 747 aaPredicted RBP12.48□□□□□ -0.41
HDAC7-226ENST00000547259 PLD4Q96BZ4 506 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 RAB6CQ9H0N0 254 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 GOLPH3Q9H4A6 298 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 SMOC1Q9H4F8 434 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 TMEM51Q9NW97 253 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 CALCOCO1Q9P1Z2 691 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 LSM7Q9UK45 103 aaKnown RBP12.48□□□□□ -0.41
HDAC7-226ENST00000547259 PLXND1Q9Y4D7 1925 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 FRYQ5TBA9 3013 aa12.48□□□□□ -0.41
HDAC7-226ENST00000547259 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
HDAC7-226ENST00000547259 PRPSAP2O60256 369 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms