RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 XRCC4Q13426 336 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 PDK1Q15118 436 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 NOMO1Q15155 1222 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 CYP1B1Q16678 543 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 C6orf118Q5T5N4 469 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 DRICH1Q6PGQ1 229 aaPredicted RBP16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 NLRP14Q86W24 1093 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 UMODL1-AS1Q8N2C9 162 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 ACTL9Q8TC94 416 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 ATP2A3Q93084 1043 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 MAGOHBQ96A72 148 aaKnown RBP16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 PRICKLE1Q96MT3 831 aaPredicted RBP16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 HERPUD2Q9BSE4 406 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 PHF7Q9BWX1 381 aaPredicted RBP16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 CARD6Q9BX69 1037 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 AP1M1Q9BXS5 423 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 LRRC19Q9H756 370 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 SPHK2Q9NRA0 654 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 SMARCAL1Q9NZC9 954 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 HEY1Q9Y5J3 304 aa16.28■□□□□ 0.2
TRAFD1-203ENST00000547063 HACD1B0YJ81 288 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 PPP1R12AO14974 1030 aaPredicted RBP16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 TBL1XO60907 577 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 PHF2O75151 1096 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 SLU7O95391 586 aaKnown RBP16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 ADH1CP00326 375 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 PSMC3P17980 439 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 OR1E1P30953 314 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 FNTAP49354 379 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 RPS24P62847 133 aaKnown RBP16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 OTUD4Q01804 1114 aaKnown RBP16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 FCHO2Q0JRZ9 810 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 NR1H3Q13133 447 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 SIX1Q15475 284 aaPredicted RBP16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 ALFQ53S48 1182 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 TANGO2Q6ICL3 276 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 CCDC70Q6NSX1 233 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 C1orf228Q6PIY5 440 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 ZNF783Q6ZMS7 281 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 ADGRG2Q8IZP9 1017 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 PRELID2Q8N945 189 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 GRK7Q8WTQ7 553 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 IRF7Q92985 503 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 NXPE3Q969Y0 559 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 ETNK2Q9NVF9 386 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 MARK1Q9P0L2 795 aa16.27■□□□□ 0.2
TRAFD1-203ENST00000547063 CFAP69A5D8W1 941 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 ARHGAP42A6NI28 874 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 H0Y626 953 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 TRDMT1O14717 391 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 SCAMP3O14828 347 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 MFSD11O43934 449 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 RAMP2O60895 175 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 CNTN5O94779 1100 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 LUC7L3O95232 432 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 VCPP55072 806 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 EIF3EP60228 445 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 ZNF33AQ06730 810 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 CDH18Q13634 790 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 BYSLQ13895 437 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 SMAD2Q15796 467 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 PARP15Q460N3 678 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 ARTNQ5T4W7 220 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 TPGS1Q6ZTW0 290 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 TFAP2DQ7Z6R9 452 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 CDKL3Q8IVW4 592 aaPredicted RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 CFAP52Q8N1V2 620 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 CCDC26Q8TAB7 109 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 RIN3Q8TB24 985 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 C1orf54Q8WWF1 131 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 NKD2Q969F2 451 aaPredicted RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 RSPRY1Q96DX4 576 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 SLC2A11Q9BYW1 496 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 MAGEH1Q9H213 219 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 RBM12Q9NTZ6 932 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 DTLQ9NZJ0 730 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 DRG1Q9Y295 367 aaKnown RBP16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 TBC1D30Q9Y2I9 924 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 WNT6Q9Y6F9 365 aa16.26■□□□□ 0.19
TRAFD1-203ENST00000547063 ILVBLA1L0T0 632 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 ANHXE9PGG2 379 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 H7C0C1 242 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 CHADO15335 359 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 MTSS1O43312 755 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 LIASO43766 372 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 PENKP01210 267 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 RBP3P10745 1247 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 PECAM1P16284 738 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 ATP5OP48047 213 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 GBE1Q04446 702 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 GAD2Q05329 585 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 POLD3Q15054 466 aaPredicted RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 EML3Q32P44 896 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 AFMIDQ63HM1 303 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 RNF43Q68DV7 783 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 CCDC137Q6PK04 289 aaKnown RBP16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 VITQ6UXI7 678 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 MAATS1Q7Z4T9 603 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 MFN1Q8IWA4 741 aa16.25■□□□□ 0.19
TRAFD1-203ENST00000547063 CCDC105Q8IYK2 499 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms