RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 DPP6P42658 865 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 PLK1P53350 603 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 COPAP53621 1224 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 ASIC2Q16515 512 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 TMPRSS6Q8IU80 811 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 OR2T3Q8NH03 318 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 RXFP2Q8WXD0 754 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 IGSF8Q969P0 613 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 IQCDQ96DY2 449 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 C1orf74Q96LT6 269 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 SYT11Q9BT88 431 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 NUP58Q9BVL2 599 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 SELENOOQ9BVL4 669 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 MKRN2Q9H000 416 aaKnown RBP16.39■□□□□ 0.21
DDX54-204ENST00000546898 AIPL1Q9NZN9 384 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 USP36Q9P275 1121 aaKnown RBP16.39■□□□□ 0.21
DDX54-204ENST00000546898 SUN2Q9UH99 717 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 CYP8B1Q9UNU6 501 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 C2CD4BA6NLJ0 364 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 KRT3P12035 628 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 PDGFRAP16234 1089 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 GGCXP38435 758 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 PBX1P40424 430 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 ID4P47928 161 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 DHPSP49366 369 aaPredicted RBP16.38■□□□□ 0.21
DDX54-204ENST00000546898 CDH4P55283 916 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 UBASH3AP57075 661 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 CREB5Q02930 508 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 SULT2A1Q06520 285 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 ARID5BQ14865 1188 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 SFMBT2Q5VUG0 894 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 ACAD10Q6JQN1 1059 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 CXorf57Q6NSI4 855 aaKnown RBP16.38■□□□□ 0.21
DDX54-204ENST00000546898 LRRC31Q6UY01 552 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 STRADAQ7RTN6 431 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 CYP2U1Q7Z449 544 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 CIR1Q86X95 450 aaPredicted RBP16.38■□□□□ 0.21
DDX54-204ENST00000546898 FRMD1Q8N878 549 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 JOSD2Q8TAC2 188 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 PRCCQ92733 491 aaPredicted RBP16.38■□□□□ 0.21
DDX54-204ENST00000546898 ERLEC1Q96DZ1 483 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 MYO19Q96H55 970 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 VCPIP1Q96JH7 1222 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 HAPLN3Q96S86 360 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 SIK2Q9H0K1 926 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 SLC6A17Q9H1V8 727 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 ANLNQ9NQW6 1124 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.38■□□□□ 0.21
DDX54-204ENST00000546898 ITIH6Q6UXX5 1313 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 GON4LQ3T8J9 2241 aa16.38■□□□□ 0.21
DDX54-204ENST00000546898 CHD5Q8TDI0 1954 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 A0A1W2PQJ5 194 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 ANKRD62A6NC57 917 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 SIGLEC16A6NMB1 481 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 I6L893 689 aaPredicted RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 ACADMP11310 421 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 TNFAIP3P21580 790 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 ATXN1P54253 815 aaKnown RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 ATP11AP98196 1134 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 ECT2LQ008S8 904 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 RPL6Q02878 288 aaKnown RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 ZNF177Q13360 481 aaPredicted RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 HNRNPA1L2Q32P51 320 aaKnown RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 ARL13BQ3SXY8 428 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 CCDC14Q49A88 953 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 RNF219Q5W0B1 726 aaPredicted RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 LYSMD4Q5XG99 296 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 DNAJC24Q6P3W2 148 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 C14orf80Q86SX3 495 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 FAM131BQ86XD5 332 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 ZNF683Q8IZ20 524 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 C12orf50Q8NA57 414 aaPredicted RBP16.37■□□□□ 0.21
DDX54-204ENST00000546898 NETO1Q8TDF5 533 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 MRGPRX3Q96LB0 322 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 ITM2CQ9NQX7 267 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 ERVW-1Q9UQF0 538 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 TBC1D30Q9Y2I9 924 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 CACNA1AO00555 2505 aa16.37■□□□□ 0.21
DDX54-204ENST00000546898 DMXL1Q9Y485 3027 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 IGLV3-10A0A075B6K4 115 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 TCRBV5S1A1TA0A578 114 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 DRGXA6NNA5 263 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 IGLV3-19P01714 112 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 GPD1P21695 349 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 CD6P30203 668 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 OXTRP30559 389 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 HOXD12P35452 270 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 VASPP50552 380 aaPredicted RBP16.36■□□□□ 0.21
DDX54-204ENST00000546898 IRAK1P51617 712 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 ZBTB16Q05516 673 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 CDO1Q16878 200 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 C15orf59Q2T9L4 293 aaPredicted RBP16.36■□□□□ 0.21
DDX54-204ENST00000546898 PHLDB2Q86SQ0 1253 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 TMEFF1Q8IYR6 380 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 MCOLN2Q8IZK6 566 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 APCDD1Q8J025 514 aa16.36■□□□□ 0.21
DDX54-204ENST00000546898 ZNF366Q8N895 744 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms