RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 DHX40Q8IX18 779 aaKnown RBP13.01□□□□□ -0.33
COPS7A-221ENST00000546229 SAP25Q8TEE9 199 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 PTPRN2Q92932 1015 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 CRELD1Q96HD1 420 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 CEP63Q96MT8 703 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 NT5C1BQ96P26 610 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 TSG101Q99816 390 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 SUN2Q9UH99 717 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 FZD4Q9ULV1 537 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 ERVW-1Q9UQF0 538 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 NAALADL1Q9UQQ1 740 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 PCDHB4Q9Y5E5 795 aa13.01□□□□□ -0.33
COPS7A-221ENST00000546229 URB1O60287 2271 aaKnown RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 COL27A1Q8IZC6 1860 aaPredicted RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 A0A1W2PP55 124 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 FAM149AA5PLN7 773 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 CBX4O00257 560 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 P4HA2O15460 535 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 VAV1P15498 845 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 STK19P49842 368 aaPredicted RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 CCR5P51681 352 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 PPP2CBP62714 309 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 PPP2CAP67775 309 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 ARTNQ5T4W7 220 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 CXorf57Q6NSI4 855 aaKnown RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 APCDD1Q8J025 514 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 CFAP52Q8N1V2 620 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 PPM1KQ8N3J5 372 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 ZNF557Q8N988 423 aaPredicted RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 OR2T34Q8NGX1 318 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 ADAM32Q8TC27 787 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 FRS2Q8WU20 508 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 TSC1Q92574 1164 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 ALG14Q96F25 216 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 SERPINB11Q96P15 392 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 ELF4Q99607 663 aaPredicted RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 NEUROG2Q9H2A3 272 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 METTL14Q9HCE5 456 aaKnown RBP13□□□□□ -0.33
COPS7A-221ENST00000546229 FBXL12Q9NXK8 326 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 STIM2Q9P246 746 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 TJP2Q9UDY2 1190 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 SLCO3A1Q9UIG8 710 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 MAN1B1Q9UKM7 699 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 PTPRQQ9UMZ3 2332 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 DOCK9Q9BZ29 2069 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 MYLKQ15746 1914 aa13□□□□□ -0.33
COPS7A-221ENST00000546229 TARSL2A2RTX5 802 aaKnown RBP12.99□□□□□ -0.33
COPS7A-221ENST00000546229 TRABD2BA6NFA1 517 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 SRPRAP08240 638 aaKnown RBP12.99□□□□□ -0.33
COPS7A-221ENST00000546229 MZF1P28698 734 aaPredicted RBP12.99□□□□□ -0.33
COPS7A-221ENST00000546229 EPHA8P29322 1005 aaPredicted RBP12.99□□□□□ -0.33
COPS7A-221ENST00000546229 ACADVLP49748 655 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
COPS7A-221ENST00000546229 IRAK1P51617 712 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 CLDN6P56747 220 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 OTUD1Q5VV17 481 aaPredicted RBP12.99□□□□□ -0.33
COPS7A-221ENST00000546229 DHRS13Q6UX07 377 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 RRAGAQ7L523 313 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 GATAD2AQ86YP4 633 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 MMAAQ8IVH4 418 aaKnown RBP12.99□□□□□ -0.33
COPS7A-221ENST00000546229 SCUBE3Q8IX30 993 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 GALNT15Q8N3T1 639 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 OR52K2Q8NGK3 314 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 STK32AQ8WU08 396 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 TIGD1Q96MW7 591 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 MIS12Q9H081 205 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 ACP6Q9NPH0 428 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 ARHGAP20Q9P2F6 1191 aa12.99□□□□□ -0.33
COPS7A-221ENST00000546229 EDDM13A0A1B0GTR0 161 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 KCNU1A8MYU2 1149 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 E5RJQ4 531 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 TACR2P21452 398 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 SLC8A1P32418 973 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 NXPH1P58417 271 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 CYP4F3Q08477 520 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 CDH18Q13634 790 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 SUZ12Q15022 739 aaKnown RBP12.98□□□□□ -0.33
COPS7A-221ENST00000546229 TAF5Q15542 800 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 PRAMEF14Q5SWL7 426 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 RAP1GAP2Q684P5 730 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 TMEM110Q86TL2 294 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 CIR1Q86X95 450 aaPredicted RBP12.98□□□□□ -0.33
COPS7A-221ENST00000546229 SPATS2Q86XZ4 545 aaKnown RBP12.98□□□□□ -0.33
COPS7A-221ENST00000546229 ELOA2Q8IYF1 753 aaPredicted RBP12.98□□□□□ -0.33
COPS7A-221ENST00000546229 STK40Q8N2I9 435 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 CARNMT1Q8N4J0 409 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 DHTKD1Q96HY7 919 aaPredicted RBP12.98□□□□□ -0.33
COPS7A-221ENST00000546229 ACE2Q9BYF1 805 aaPredicted RBP12.98□□□□□ -0.33
COPS7A-221ENST00000546229 SARDHQ9UL12 918 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 PCDHGA1Q9Y5H4 931 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 OR51B4Q9Y5P0 310 aa12.98□□□□□ -0.33
COPS7A-221ENST00000546229 SETXQ7Z333 2677 aaKnown RBP12.98□□□□□ -0.33
COPS7A-221ENST00000546229 ASH1LQ9NR48 2969 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms