RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 MS4A2Q01362 244 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 SLC10A2Q12908 348 aaPredicted RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 CEACAM7Q14002 265 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 PPP2R5DQ14738 602 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 SH3D19Q5HYK7 790 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 FKBP1CQ5VVH2 108 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 LRRC8BQ6P9F7 803 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 RNF148Q8N7C7 305 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 INO80BQ9C086 356 aaPredicted RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 WDR55Q9H6Y2 383 aaPredicted RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 H0YIN7 160 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 ATP6V1G1O75348 118 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 H2AFYO75367 372 aaKnown RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 ERVK-10P10266 1014 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 ZNF23P17027 643 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 TMEM132AQ24JP5 1023 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 GRTP1Q5TC63 336 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 DUS1LQ6P1R4 473 aaKnown RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 TRIM67Q6ZTA4 783 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 DCLK2Q8N568 766 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 SNRNP27Q8WVK2 155 aaKnown RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 KLHL32Q96NJ5 620 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 SLC4A5Q9BY07 1137 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 WDR41Q9HAD4 459 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 NRBP2Q9NSY0 501 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 MTMR10Q9NXD2 777 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 SIX4Q9UIU6 781 aa14.53□□□□□ -0.08
SRP54-202ENST00000546080 CNOT11Q9UKZ1 510 aaKnown RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 FAF1Q9UNN5 650 aaPredicted RBP14.53□□□□□ -0.08
SRP54-202ENST00000546080 MAGEB3O15480 346 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 TRIM13O60858 407 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 BCAS2O75934 225 aaPredicted RBP14.52□□□□□ -0.08
SRP54-202ENST00000546080 RAD17O75943 681 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 CAPNS1P04632 268 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 PPARGP37231 505 aaPredicted RBP14.52□□□□□ -0.08
SRP54-202ENST00000546080 NR2C2P49116 596 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 RGS7P49802 495 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 CDK9P50750 372 aaKnown RBP14.52□□□□□ -0.08
SRP54-202ENST00000546080 ART3Q13508 389 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 STYK1Q6J9G0 422 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 MPZL3Q6UWV2 235 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 LPCAT2Q7L5N7 544 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 PLD6Q8N2A8 252 aaKnown RBP14.52□□□□□ -0.08
SRP54-202ENST00000546080 LRRC43Q8N309 656 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 C1orf127Q8N9H9 656 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 TMEM102Q8N9M5 508 aaPredicted RBP14.52□□□□□ -0.08
SRP54-202ENST00000546080 ARNTL2Q8WYA1 636 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 EME1Q96AY2 570 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 HSPBAP1Q96EW2 488 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 ATXN7L3BQ96GX2 97 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 CPNE1Q99829 537 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 NAT9Q9BTE0 207 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 ILKAPQ9H0C8 392 aaPredicted RBP14.52□□□□□ -0.08
SRP54-202ENST00000546080 NR2E3Q9Y5X4 410 aa14.52□□□□□ -0.08
SRP54-202ENST00000546080 A0A0A0MRY4 1105 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 A0A1B0GTW7 788 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 ZNF487B1APH4 448 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 G3V2L1 256 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 SLC22A2O15244 555 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 ITGB3P05106 788 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 CXCL8P10145 99 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 MPSTP25325 297 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 TARBP2Q15633 366 aaKnown RBP14.51□□□□□ -0.09
SRP54-202ENST00000546080 LSM12Q3MHD2 195 aaKnown RBP14.51□□□□□ -0.09
SRP54-202ENST00000546080 SEL1L3Q68CR1 1132 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 KLHL35Q6PF15 583 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 CHERPQ8IWX8 916 aaKnown RBP14.51□□□□□ -0.09
SRP54-202ENST00000546080 TMEM130Q8N3G9 435 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 COLGALT1Q8NBJ5 622 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 RNF149Q8NC42 400 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 FNDC8Q8TC99 324 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 HTR3CQ8WXA8 447 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 CERS2Q96G23 380 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 SPATA13Q96N96 652 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 DHX35Q9H5Z1 703 aaKnown RBP14.51□□□□□ -0.09
SRP54-202ENST00000546080 RPF1Q9H9Y2 349 aaKnown RBP14.51□□□□□ -0.09
SRP54-202ENST00000546080 GBA2Q9HCG7 927 aaPredicted RBP14.51□□□□□ -0.09
SRP54-202ENST00000546080 SYBUQ9NX95 663 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 ADAM28Q9UKQ2 775 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 TSPAN16Q9UKR8 245 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 ARHGEF37A1IGU5 675 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 HDAC3O15379 428 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 COQ9O75208 318 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 RNASEH2AO75792 299 aaKnown RBP14.51□□□□□ -0.09
SRP54-202ENST00000546080 AMHP03971 560 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 POLBP06746 335 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 EPHA3P29320 983 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 MLH1P40692 756 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 NRF1Q16656 503 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 CES3Q6UWW8 571 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 CROCCP3Q8IVE0 287 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 NUF2Q9BZD4 464 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 EPS15L1Q9UBC2 864 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 SCN4AP35499 1836 aa14.51□□□□□ -0.09
SRP54-202ENST00000546080 MATN2O00339 956 aa14.5□□□□□ -0.09
SRP54-202ENST00000546080 MAFO75444 373 aaPredicted RBP14.5□□□□□ -0.09
SRP54-202ENST00000546080 IL18RAPO95256 599 aa14.5□□□□□ -0.09
SRP54-202ENST00000546080 NFICP08651 508 aa14.5□□□□□ -0.09
SRP54-202ENST00000546080 TCN1P20061 433 aaPredicted RBP14.5□□□□□ -0.09
SRP54-202ENST00000546080 CYP3A5P20815 502 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms