RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 HERC3Q15034 1050 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CHI3L2Q15782 390 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 DPYSL2Q16555 572 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 C2CD6Q53TS8 623 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 FAM182BQ5T319 152 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 FAM102AQ5T9C2 384 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ATF7IP2Q5U623 682 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 C1orf146Q5VVC0 180 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 IRAK1BP1Q5VVH5 260 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 TXNRD3NBQ6F5E7 133 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CATSPERGQ6ZRH7 1159 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 PRPF39Q86UA1 669 aaKnown RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CAND1Q86VP6 1230 aaKnown RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 PDSS2Q86YH6 399 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ARID3BQ8IVW6 561 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CTAGE3PQ8IX95 158 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 NDUFAF2Q8N183 169 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 PPM1NQ8N819 430 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 OR6Y1Q8NGX8 325 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 RDH11Q8TC12 318 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 DDI1Q8WTU0 396 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 NRG4Q8WWG1 115 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 NANOS1Q8WY41 292 aaKnown RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 DLG3Q92796 817 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 TMEM143Q96AN5 459 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 PPP1R14BQ96C90 147 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ATG4CQ96DT6 458 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ZBTB45Q96K62 511 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 SIGLEC10Q96LC7 697 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 TEPSINQ96N21 525 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 RILPQ96NA2 401 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 QKIQ96PU8 341 aaKnown RBP eCLIP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 HAPLN3Q96S86 360 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CPXM1Q96SM3 734 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 SH2D3AQ9BRG2 576 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 RTKNQ9BST9 563 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 GLIS2Q9BZE0 524 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 KLHL4Q9C0H6 718 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 MYOZ2Q9NPC6 264 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 FBXO6Q9NRD1 293 aaPredicted RBP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 HOMER2Q9NSB8 354 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.65□□□□□ -1.34
SNHG1-225ENST00000545920 KLHL11Q9NVR0 708 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 NSMCE4AQ9NXX6 385 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 CIDEBQ9UHD4 219 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 SLC7A8Q9UHI5 535 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 TMCO1Q9UM00 188 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 PADI4Q9UM07 663 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ARHGAP26Q9UNA1 814 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 INPP5FQ9Y2H2 1132 aa6.65□□□□□ -1.34
SNHG1-225ENST00000545920 ARID2Q68CP9 1835 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 FAM237BA0A1B0GVD1 139 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 TCRBV7S3A2A0A539 114 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MAGEB16A2A368 324 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 GOLGA8RI6L899 631 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 KCNN4O15554 427 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MTSS1O43312 755 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 DENRO43583 198 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 BUD23O43709 281 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 HBP1O60381 514 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PLIN3O60664 434 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 FARP2O94887 1054 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CALCAP01258 141 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MPOP05164 745 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 ENO1P06733 434 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 FAM163BP0C2L3 166 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 USP17L7P0C7H9 530 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CYP2C9P11712 490 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 UQCRBP14927 111 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CPA3P15088 417 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RHOQP17081 205 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PGAM1P18669 254 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MSX1P28360 303 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 SDC4P31431 198 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CPOXP36551 454 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PEX19P40855 299 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MAGEA12P43365 314 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 AIF1P55008 147 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 SOX10P56693 466 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 SESN3P58005 492 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 DYNLT1P63172 113 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MRPS5P82675 430 aaKnown RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RBP5P82980 135 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CREB5Q02930 508 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 NIPAL4Q0D2K0 466 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 LAMTOR4Q0VGL1 99 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CDC16Q13042 620 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RFTN1Q14699 578 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 PCBP1Q15365 356 aaKnown RBP eCLIP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 SLC5A9Q2M3M2 681 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 LIN52Q52LA3 116 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 SPANXN3Q5MJ09 141 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 RABGAP1LQ5R372 815 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 GRTP1Q5TC63 336 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 CYP4A22Q5TCH4 519 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF385CQ66K41 422 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-225ENST00000545920 MBLAC2Q68D91 279 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 SCARA3Q6AZY7 606 aa6.64□□□□□ -1.35
SNHG1-225ENST00000545920 LRRC8BQ6P9F7 803 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms