RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ZNF180Q9UJW8 692 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 NUDT5Q9UKK9 219 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 AAR2Q9Y312 384 aaKnown RBP8.8□□□□□ -1
CLIP1-218ENST00000545889 LAMB1P07942 1786 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 A8MUI8 341 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 UBOX5O94941 541 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 CACNA2D1P54289 1103 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 ABCE1P61221 599 aaKnown RBP8.8□□□□□ -1
CLIP1-218ENST00000545889 FPGSQ05932 587 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 BCL2L1Q07817 233 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 SETMARQ53H47 684 aaPredicted RBP8.8□□□□□ -1
CLIP1-218ENST00000545889 FAM46CQ5VWP2 391 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 TLDC1Q6P9B6 456 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 BRSK2Q8IWQ3 736 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 LPCAT1Q8NF37 534 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 TMC2Q8TDI7 906 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 FAM172AQ8WUF8 416 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 SNF8Q96H20 258 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 TUBB6Q9BUF5 446 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 BBS2Q9BXC9 721 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 PITPNM3Q9BZ71 974 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 GTF3C4Q9UKN8 822 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 BARX2Q9UMQ3 279 aaPredicted RBP8.8□□□□□ -1
CLIP1-218ENST00000545889 PLAGL2Q9UPG8 496 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 PCDHGA4Q9Y5G9 962 aa8.8□□□□□ -1
CLIP1-218ENST00000545889 MGRN1O60291 552 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 MAP3K6O95382 1288 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 C22orf31O95567 290 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 GABRR2P28476 465 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 PTPN7P35236 360 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 ANKMY2Q8IV38 441 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 CXorf40AQ8TE69 158 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 PLEKHA8Q96JA3 519 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 MYOCQ99972 504 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 C11orf49Q9H6J7 331 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 TASP1Q9H6P5 420 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 RBM22Q9NW64 420 aaKnown RBP eCLIP8.79□□□□□ -1
CLIP1-218ENST00000545889 ARHGAP28Q9P2N2 729 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 LZTS1Q9Y250 596 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 LRRC10BA6NIK2 292 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 NFICP08651 508 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 SPATA31D3P0C874 917 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 ACRP10323 421 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 CYP2A6P11509 494 aaPredicted RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 NDST1P52848 882 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 YWHAZP63104 245 aaKnown RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 SMAD3P84022 425 aaKnown RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 ADIGQ0VDE8 80 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 TOMM20Q15388 145 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 INSCQ1MX18 579 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 SPATA31D4Q6ZUB0 917 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 LRRC8DQ7L1W4 858 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 C16orf59Q7L2K0 433 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 TTC7BQ86TV6 843 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 FAM124AQ86V42 546 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 MYO1HQ8N1T3 1032 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 UROC1Q96N76 676 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 CNOT10Q9H9A5 744 aaKnown RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.79□□□□□ -1
CLIP1-218ENST00000545889 MRGBPQ9NV56 204 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 KIF17Q9P2E2 1029 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 DEC1Q9P2X7 70 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 STOML1Q9UBI4 398 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 DUSP10Q9Y6W6 482 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 ADGRA2Q96PE1 1338 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 RNF225M0QZC1 329 aaPredicted RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 SLC18A3Q16572 532 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 PRR23BQ6ZRT6 265 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 RFX8Q6ZV50 586 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 NXF3Q9H4D5 531 aaKnown RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 MINDY3Q9H8M7 445 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 ADA2Q9NZK5 511 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 F8W810 466 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 TUBP50607 506 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 PSMD7P51665 324 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 CRYBB1P53674 252 aaPredicted RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 KCNMA1Q12791 1236 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 BYSLQ13895 437 aaKnown RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 MYBPC2Q14324 1141 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 RAB30Q15771 203 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 BMT2Q1RMZ1 405 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 KCTD21Q4G0X4 260 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 MARK2Q7KZI7 788 aaKnown RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 TRAPPC5Q8IUR0 188 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 ST13P4Q8IZP2 240 aaPredicted RBP8.79□□□□□ -1
CLIP1-218ENST00000545889 SIX5Q8N196 739 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 OR9Q1Q8NGQ5 310 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 SLC2A14Q8TDB8 520 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 TTPALQ9BTX7 342 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 HPS4Q9NQG7 708 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 ARHGAP20Q9P2F6 1191 aa8.79□□□□□ -1
CLIP1-218ENST00000545889 APC2O95996 2303 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 CNTRLQ7Z7A1 2325 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 MYADML2A6NDP7 307 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 FAM187AA6NFU0 413 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 ZSCAN5CA6NGD5 496 aaPredicted RBP8.78□□□□□ -1
CLIP1-218ENST00000545889 CYP7B1O75881 506 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 ADH1CP00326 375 aa8.78□□□□□ -1
CLIP1-218ENST00000545889 SERPINA4P29622 427 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms