RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 RLN3Q8WXF3 142 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 LMLNQ96KR4 655 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 HAPLN3Q96S86 360 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 AGPAT1Q99943 283 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 TKTL2Q9H0I9 626 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 RETREG1Q9H6L5 497 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 PIGVQ9NUD9 493 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 SEPT11Q9NVA2 429 aaKnown RBP12.19□□□□□ -0.46
HDAC4-216ENST00000544989 ADAM22Q9P0K1 906 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 USP36Q9P275 1121 aaKnown RBP12.19□□□□□ -0.46
HDAC4-216ENST00000544989 XPO7Q9UIA9 1087 aaKnown RBP12.19□□□□□ -0.46
HDAC4-216ENST00000544989 SCML1Q9UN30 329 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 INVSQ9Y283 1065 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 RALGAPA1Q6GYQ0 2036 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 FASNP49327 2511 aaKnown RBP12.19□□□□□ -0.46
HDAC4-216ENST00000544989 EML5Q05BV3 1969 aa12.19□□□□□ -0.46
HDAC4-216ENST00000544989 CNOT1A5YKK6 2376 aaKnown RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 IGHV1OR15-9A0A0B4J2B8 117 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 KHNYNO15037 678 aaKnown RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 RNASEH1O60930 286 aaKnown RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 PAGE1O75459 146 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 IGLV3-19P01714 112 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 TPM3P06753 285 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CHRNB2P17787 502 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 BCKDHBP21953 392 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 PRKCHP24723 683 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CD6P30203 668 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 PLK1P53350 603 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 ECT2LQ008S8 904 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 PTPRNQ16849 979 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 RSPO4Q2I0M5 234 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 PLEKHG6Q3KR16 790 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 TTC31Q49AM3 519 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 FIGNQ5HY92 759 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 FBXL22Q6P050 247 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 SYT12Q8IV01 421 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 ABCA7Q8IZY2 2146 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CCAR2Q8N163 923 aaKnown RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CFAP52Q8N1V2 620 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 C3orf20Q8ND61 904 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 WFDC5Q8TCV5 224 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CYB5D2Q8WUJ1 264 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 SORCS1Q8WY21 1168 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 VCPIP1Q96JH7 1222 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CNTNAP3BQ96NU0 1288 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 TBCBQ99426 244 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 NUP58Q9BVL2 599 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CNTNAP3Q9BZ76 1288 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 PCED1AQ9H1Q7 454 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 ITM2CQ9NQX7 267 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 EVLQ9UI08 416 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 MBD1Q9UIS9 605 aaPredicted RBP12.18□□□□□ -0.46
HDAC4-216ENST00000544989 CYP8B1Q9UNU6 501 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 HS3ST4Q9Y661 456 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
HDAC4-216ENST00000544989 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 EDDM13A0A1B0GTR0 161 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 TARSL2A2RTX5 802 aaKnown RBP12.17□□□□□ -0.46
HDAC4-216ENST00000544989 SLC30A4O14863 429 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 TEX33O43247 280 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 ENDOD1O94919 500 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 KRT3P12035 628 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 PDGFRAP16234 1089 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 FLT3P36888 993 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 PTPN9P43378 593 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 HNRNPA1L2Q32P51 320 aaKnown RBP12.17□□□□□ -0.46
HDAC4-216ENST00000544989 WDR45BQ5MNZ6 344 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 STRADAQ7RTN6 431 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 BNIPLQ7Z465 357 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
HDAC4-216ENST00000544989 TMEFF1Q8IYR6 380 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 CADM4Q8NFZ8 388 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 SLC30A5Q8TAD4 765 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 C11orf70Q9BRQ4 267 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 SELENOOQ9BVL4 669 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 NUSAP1Q9BXS6 441 aaKnown RBP12.17□□□□□ -0.46
HDAC4-216ENST00000544989 MKRN2Q9H000 416 aaKnown RBP12.17□□□□□ -0.46
HDAC4-216ENST00000544989 SIK2Q9H0K1 926 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 CBX8Q9HC52 389 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 METTL5Q9NRN9 209 aaKnown RBP12.17□□□□□ -0.46
HDAC4-216ENST00000544989 SUSD2Q9UGT4 822 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 VANGL2Q9ULK5 521 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.17□□□□□ -0.46
HDAC4-216ENST00000544989 THADAQ6YHU6 1953 aa12.17□□□□□ -0.46
HDAC4-216ENST00000544989 CKAP5Q14008 2032 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ITIH6Q6UXX5 1313 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 C2CD4BA6NLJ0 364 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 SIGLEC16A6NMB1 481 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ADCY5O95622 1261 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 DNTTP04053 509 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 GNSP15586 552 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 TNFAIP3P21580 790 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 TPMTP51580 245 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 COPAP53621 1224 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 KRT83P78385 493 aa12.16□□□□□ -0.46
HDAC4-216ENST00000544989 NRG1Q02297 640 aaPredicted RBP12.16□□□□□ -0.46
HDAC4-216ENST00000544989 ZNF33AQ06730 810 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms