RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 LSP1P33241 339 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 TUBP50607 506 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 DEFB103AP81534 67 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 GUCY1A3Q02108 690 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 BTG3Q14201 252 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-214ENST00000544552 TEX44Q53QW1 395 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 SPOUT1Q5T280 376 aaKnown RBP13.09□□□□□ -0.31
PAAF1-214ENST00000544552 AFMIDQ63HM1 303 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 RWDD4Q6NW29 188 aaKnown RBP13.09□□□□□ -0.31
PAAF1-214ENST00000544552 CYS1Q717R9 158 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 ZNF771Q7L3S4 317 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-214ENST00000544552 IGDCC3Q8IVU1 814 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 RTL3Q8N8U3 475 aaKnown RBP13.09□□□□□ -0.31
PAAF1-214ENST00000544552 ZSCAN18Q8TBC5 510 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-214ENST00000544552 SIGLEC10Q96LC7 697 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 MYRFLQ96LU7 910 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 DHRS4Q9BTZ2 278 aa13.09□□□□□ -0.31
PAAF1-214ENST00000544552 IGLV3-10A0A075B6K4 115 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 ERI2A8K979 691 aaKnown RBP13.08□□□□□ -0.32
PAAF1-214ENST00000544552 AVILO75366 819 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 CSH1P0DML2 217 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 CSH2P0DML3 217 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 EFEMP1Q12805 493 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 RAB33AQ14088 237 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 PIK3R6Q5UE93 754 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 ITPRIPL1Q6GPH6 555 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 LRRC8BQ6P9F7 803 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 KLHDC10Q6PID8 442 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 LRRC31Q6UY01 552 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 CCNJLQ8IV13 435 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 ARHGAP12Q8IWW6 846 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 CYP4X1Q8N118 509 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 AGGF1Q8N302 714 aaeCLIP13.08□□□□□ -0.32
PAAF1-214ENST00000544552 FBF1Q8TES7 1133 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 CYTH2Q99418 400 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 SENP1Q9P0U3 644 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 CTNNAL1Q9UBT7 734 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 CHMP2BQ9UQN3 213 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 HBS1LQ9Y450 684 aaKnown RBP13.08□□□□□ -0.32
PAAF1-214ENST00000544552 NR2E3Q9Y5X4 410 aa13.08□□□□□ -0.32
PAAF1-214ENST00000544552 KCNK1O00180 336 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 CACNG3O60359 315 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 SUN1O94901 812 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 RHOQP17081 205 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 RPL17P18621 184 aaKnown RBP13.07□□□□□ -0.32
PAAF1-214ENST00000544552 STX2P32856 288 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 PPM1AP35813 382 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 MS4A13Q5J8X5 152 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 NLRP14Q86W24 1093 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 KLHDC8BQ8IXV7 354 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 UMODL1-AS1Q8N2C9 162 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 GIPC2Q8TF65 315 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 FATE1Q969F0 183 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 TEKT5Q96M29 485 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 EBNA1BP2Q99848 306 aaKnown RBP13.07□□□□□ -0.32
PAAF1-214ENST00000544552 EPN3Q9H201 632 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 RETREG1Q9H6L5 497 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 IL23AQ9NPF7 189 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 SEPT10Q9P0V9 454 aa13.07□□□□□ -0.32
PAAF1-214ENST00000544552 KLHL8Q9P2G9 620 aaPredicted RBP13.07□□□□□ -0.32
PAAF1-214ENST00000544552 PSMC3IPQ9P2W1 217 aaPredicted RBP13.07□□□□□ -0.32
PAAF1-214ENST00000544552 ZC3H7BQ9UGR2 993 aaKnown RBP13.07□□□□□ -0.32
PAAF1-214ENST00000544552 MRPL42Q9Y6G3 142 aaKnown RBP13.07□□□□□ -0.32
PAAF1-214ENST00000544552 TCRBV9S1A1TA0A576 114 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 SDR42E2A6NKP2 422 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 DRGXA6NNA5 263 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 POC1B-GALNT4F8VUJ3 575 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 PSMD3O43242 534 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 TLR5O60602 858 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 SEC24AO95486 1093 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 TBX18O95935 607 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 MOCS2O96007 188 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-214ENST00000544552 HMGA1P17096 107 aaKnown RBP13.06□□□□□ -0.32
PAAF1-214ENST00000544552 PSMB4P28070 264 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 PPP3CCP48454 512 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 NDST2P52849 883 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 SLC18A1P54219 525 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 SYCP2LQ5T4T6 812 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 NUGGCQ68CJ6 796 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 KCTD11Q693B1 232 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 C14orf80Q86SX3 495 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 TRABD2AQ86V40 505 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 PDCD7Q8N8D1 485 aaKnown RBP13.06□□□□□ -0.32
PAAF1-214ENST00000544552 TRMT2BQ96GJ1 504 aaKnown RBP13.06□□□□□ -0.32
PAAF1-214ENST00000544552 XPO6Q96QU8 1125 aaKnown RBP13.06□□□□□ -0.32
PAAF1-214ENST00000544552 NAT9Q9BTE0 207 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 GBA3Q9H227 469 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.06□□□□□ -0.32
PAAF1-214ENST00000544552 TMEM248Q9NWD8 314 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 DNMT3LQ9UJW3 386 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 SLC12A8A0AV02 714 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 ZNF840PA6NDX5 716 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 MATN3O15232 486 aa13.06□□□□□ -0.32
PAAF1-214ENST00000544552 ZBTB24O43167 697 aaPredicted RBP13.06□□□□□ -0.32
PAAF1-214ENST00000544552 MAFKO60675 156 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms