RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 FCRL3Q96P31 734 aaPredicted RBP16.5■□□□□ 0.23
SCNN1A-221ENST00000543768 AGAP3Q96P47 875 aa16.5■□□□□ 0.23
SCNN1A-221ENST00000543768 PGLYRP2Q96PD5 576 aa16.5■□□□□ 0.23
SCNN1A-221ENST00000543768 WDCPQ9H6R7 721 aa16.5■□□□□ 0.23
SCNN1A-221ENST00000543768 IL1RAPL1Q9NZN1 696 aa16.5■□□□□ 0.23
SCNN1A-221ENST00000543768 PADI3Q9ULW8 664 aa16.5■□□□□ 0.23
SCNN1A-221ENST00000543768 CCDC195A0A1B0GUA6 201 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 ZBTB24O43167 697 aaPredicted RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 ZNF623O75123 536 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 SNNO75324 88 aaPredicted RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 AP2A1O95782 977 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 PDE1CQ14123 709 aaPredicted RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 PAN2Q504Q3 1202 aaKnown RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 STXBP5Q5T5C0 1151 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 KCTD11Q693B1 232 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 KYAT3Q6YP21 454 aaKnown RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 LONP2Q86WA8 852 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 FAM13CQ8NE31 585 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 HDAC11Q96DB2 347 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 ACBD6Q9BR61 282 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 TKTL2Q9H0I9 626 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 UPF3AQ9H1J1 476 aaKnown RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 EBF2Q9HAK2 575 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 SLC24A3Q9HC58 644 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 TMLHEQ9NVH6 421 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 OR12D3Q9UGF7 316 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 EMCNQ9ULC0 261 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 RPS6KL1Q9Y6S9 549 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 TPP1O14773 563 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 HNRNPCL1O60812 293 aaKnown RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 USP12O75317 370 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 WFS1O76024 890 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 POMCP01189 267 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 POLBP06746 335 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 RPSAP08865 295 aaKnown RBP16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 ERVK-10P10266 1014 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 ODC1P11926 461 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 BDNFP23560 247 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 CD52P31358 61 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 BRCC3P46736 316 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 GALNT2Q10471 571 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 CRHR2Q13324 411 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 TTC7BQ86TV6 843 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 KCNK4Q9NYG8 393 aa16.49■□□□□ 0.23
SCNN1A-221ENST00000543768 ZNF189O75820 626 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 B3GAT3O94766 335 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 LRIG2O94898 1065 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 CYP11A1P05108 521 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 ITGA2BP08514 1039 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 GARSP41250 739 aaKnown RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 ZBTB16Q05516 673 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 ZBTB17Q13105 803 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 SMAD1Q15797 465 aaKnown RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 SPANXN3Q5MJ09 141 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 C16orf46Q6P387 395 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 IRGQQ8WZA9 623 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 TRIB2Q92519 343 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 DPF3Q92784 378 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 CERS2Q96G23 380 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 PKMYT1Q99640 499 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 MIPEPQ99797 713 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 BRD8Q9H0E9 1235 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 PTPRDP23468 1912 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 ACCSLQ4AC99 568 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 NAIF1Q69YI7 327 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 TAC4Q86UU9 113 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 LRRTM3Q86VH5 581 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 ARID3BQ8IVW6 561 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 ZSCAN18Q8TBC5 510 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 NSL1Q96IY1 281 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 EPAS1Q99814 870 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 TUBB6Q9BUF5 446 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 MLPHQ9BV36 600 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 CASS4Q9NQ75 786 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 ZFATQ9P243 1243 aa16.48■□□□□ 0.23
SCNN1A-221ENST00000543768 NLRC5Q86WI3 1866 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 MX2P20592 715 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 THPOP40225 353 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 ZNF135P52742 658 aaPredicted RBP16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 IRX4P78413 519 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 DSC3Q14574 896 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 KRT72Q14CN4 511 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 C11orf91Q3C1V1 193 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 N4BP2L1Q5TBK1 243 aaPredicted RBP16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 RGMBQ6NW40 437 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 ZCCHC23Q6ZST2 131 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 TMEM135Q86UB9 458 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 ALYREFQ86V81 257 aaKnown RBP16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 RASSF3Q86WH2 238 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 SMC1BQ8NDV3 1235 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 TMEM209Q96SK2 561 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 NMUR2Q9GZQ4 415 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 GBA3Q9H227 469 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 LRRC40Q9H9A6 602 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 BATF3Q9NR55 127 aa16.47■□□□□ 0.23
SCNN1A-221ENST00000543768 FCHO1O14526 889 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms