RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SYNDIG1LA6NDD5 238 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 C5orf58C9J3I9 102 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 CBFA2T3O75081 653 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 USP12O75317 370 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 CRADDP78560 199 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 FRG1Q14331 258 aaKnown RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 ZRANB3Q5FWF4 1079 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 PLEKHH3Q7Z736 793 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 OTULINQ96BN8 352 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 POLR1BQ9H9Y6 1135 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 LZTS3O60299 673 aaPredicted RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 LYPLA1O75608 230 aaPredicted RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 VCLP18206 1134 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PSME3P61289 254 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 VAC14Q08AM6 782 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 VPS37AQ8NEZ2 397 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 TMEM245Q9H330 911 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 SLC8A2Q9UPR5 921 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 VAPBO95292 243 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 CRABP2P29373 138 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 GRIA3P42263 894 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 GALK1P51570 392 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 HIRAP54198 1017 aaPredicted RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 RP9Q8TA86 221 aaKnown RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PSMD13Q9UNM6 376 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PARNO95453 639 aaKnown RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PLK1P53350 603 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 SREBF2Q12772 1141 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 RINLQ6ZS11 566 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 SCUBE3Q8IX30 993 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PLEKHG4BQ96PX9 1271 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 DGCR6LQ9BY27 220 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PNPLA3Q9NST1 481 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 VPS9D1Q9Y2B5 631 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 CXCL11O14625 94 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 HDAC3O15379 428 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 MFN2O95140 757 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 YY1P25490 414 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 RPS6KA3P51812 740 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 NIPA1Q7RTP0 329 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 OR8H2Q8N162 312 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 MARK4Q96L34 752 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 P2RX7Q99572 595 aaKnown RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 CEP44Q9C0F1 390 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 C12orf65Q9H3J6 166 aaKnown RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PARVBQ9HBI1 364 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 PRPF19Q9UMS4 504 aaKnown RBP19.74■□□□□ 0.75
SUDS3-204ENST00000543473 NALCNQ8IZF0 1738 aa19.74■□□□□ 0.75
SUDS3-204ENST00000543473 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
SUDS3-204ENST00000543473 NPY2RP49146 381 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 DGUOKQ16854 277 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 RCN3Q96D15 328 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 SLC4A5Q9BY07 1137 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 TRIM38O00635 465 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 PTPRAP18433 802 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 C6orf89Q6UWU4 347 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 ATG16L2Q8NAA4 619 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 MAGEE2Q8TD90 523 aaPredicted RBP19.73■□□□□ 0.75
SUDS3-204ENST00000543473 KREMEN1Q96MU8 473 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 ZNF317Q96PQ6 595 aaPredicted RBP19.73■□□□□ 0.75
SUDS3-204ENST00000543473 OSBPL11Q9BXB4 747 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 RRN3P2A6NIE6 340 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 ERI2A8K979 691 aaKnown RBP19.73■□□□□ 0.75
SUDS3-204ENST00000543473 MAP3K13O43283 966 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 TGDSO95455 350 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 JAM2P57087 298 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 ARMCX4Q5H9R4 360 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 EBNA1BP2Q99848 306 aaKnown RBP19.73■□□□□ 0.75
SUDS3-204ENST00000543473 TRIM24O15164 1050 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 BPGMP07738 259 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 GABRB2P47870 512 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 BST2Q10589 180 aaKnown RBP19.73■□□□□ 0.75
SUDS3-204ENST00000543473 NR1D2Q14995 579 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 LLGL2Q6P1M3 1020 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 ZDHHC24Q6UX98 284 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 PTAR1Q7Z6K3 402 aaPredicted RBP19.73■□□□□ 0.75
SUDS3-204ENST00000543473 KBTBD2Q8IY47 623 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 NAT14Q8WUY8 206 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 MTERF3Q96E29 417 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 SYTL2Q9HCH5 934 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 CPA4Q9UI42 421 aa19.73■□□□□ 0.75
SUDS3-204ENST00000543473 E5RJQ4 531 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 AVILO75366 819 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 ZNF682O95780 498 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 CCT8P50990 548 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 SFSWAPQ12872 951 aaKnown RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 C15orf59Q2T9L4 293 aaPredicted RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 AMIGO2Q86SJ2 522 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 MIER2Q8N344 545 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 ZDHHC18Q9NUE0 388 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 UTP6Q9NYH9 597 aaKnown RBP19.72■□□□□ 0.75
SUDS3-204ENST00000543473 RAD54BQ9Y620 910 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 SPDYE5A6NIY4 337 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 HACD1B0YJ81 288 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 CPB1P15086 417 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 PPP1R15BQ5SWA1 713 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 ZNF470Q6ECI4 717 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 NOTUMQ6P988 496 aa19.72■□□□□ 0.75
SUDS3-204ENST00000543473 TTC23LQ6PF05 361 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms