RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 COLGALT1Q8NBJ5 622 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 DIS3LQ8TF46 1054 aaKnown RBP24.26■■□□□ 1.47
SHD-201ENST00000543264 HSPBAP1Q96EW2 488 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 CCT7Q99832 543 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 TSPAN16Q9UKR8 245 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 MFHAS1Q9Y4C4 1052 aa24.26■■□□□ 1.47
SHD-201ENST00000543264 CHRNGP07510 517 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 P4HA1P13674 534 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 NELFEP18615 380 aaKnown RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 MPSTP25325 297 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 GARSP41250 739 aaKnown RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 HSPA13P48723 471 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 LAMTOR4Q0VGL1 99 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 FSTL1Q12841 308 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 TARBP2Q15633 366 aaKnown RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 EEF1DP3Q658K8 133 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 SCUBE3Q8IX30 993 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 RP9Q8TA86 221 aaKnown RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 KLHL32Q96NJ5 620 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 SLC4A5Q9BY07 1137 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 SYBUQ9NX95 663 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 B4GALT5O43286 388 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 ME2P23368 584 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 GP5P40197 560 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 DPP6P42658 865 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 ABCG1P45844 678 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 ATXN1P54253 815 aaKnown RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 TRIM67Q6ZTA4 783 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 ZBTB8OSQ8IWT0 167 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 ALDH16A1Q8IZ83 802 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 C12orf29Q8N999 325 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 FAM156AQ8NDB6 213 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 TSPAN14Q8NG11 270 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 PDCD6IPQ8WUM4 868 aaKnown RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 CNKSR2Q8WXI2 1034 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 GJD4Q96KN9 370 aaPredicted RBP24.25■■□□□ 1.47
SHD-201ENST00000543264 PCYT2Q99447 389 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 WDR41Q9HAD4 459 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 MORF4L1Q9UBU8 362 aa24.25■■□□□ 1.47
SHD-201ENST00000543264 PRSS51A0A1B0GVH4 220 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 G3V2L1 256 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 RNASEH2AO75792 299 aaKnown RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 CCDC130P13994 396 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 NUMBP49757 651 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 GTF2A2P52657 109 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 IRF9Q00978 393 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 ART3Q13508 389 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 FKBP1CQ5VVH2 108 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 LRRC8BQ6P9F7 803 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 MPZL3Q6UWV2 235 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 ZSCAN18Q8TBC5 510 aaPredicted RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 HTR3CQ8WXA8 447 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 QKIQ96PU8 341 aaKnown RBP eCLIP24.24■■□□□ 1.47
SHD-201ENST00000543264 TBCBQ99426 244 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 GMLQ99445 158 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 ILKAPQ9H0C8 392 aaPredicted RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 VPS33BQ9H267 617 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 CAB39LQ9H9S4 337 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 RPF1Q9H9Y2 349 aaKnown RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 GBA2Q9HCG7 927 aaPredicted RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 RSL24D1Q9UHA3 163 aaKnown RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 GPR25O00155 361 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 TRIM13O60858 407 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 MAFO75444 373 aaPredicted RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 LTFP02788 710 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 CCR10P46092 362 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 DLG2Q15700 870 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 ADRM1Q16186 407 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 TMEM198Q66K66 360 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 NXNQ6DKJ4 435 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 NUP93Q8N1F7 819 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 EME1Q96AY2 570 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 MARK4Q96L34 752 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 LGMNQ99538 433 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 GATA5Q9BWX5 397 aaPredicted RBP24.24■■□□□ 1.47
SHD-201ENST00000543264 SEMA6AQ9H2E6 1030 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 MGAMO43451 1857 aa24.24■■□□□ 1.47
SHD-201ENST00000543264 XPO1O14980 1071 aaKnown RBP24.23■■□□□ 1.47
SHD-201ENST00000543264 ATP6V1G1O75348 118 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 MLNP12872 115 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 CLCN2P51788 898 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 NDST1P52848 882 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 ATF7IP2Q5U623 682 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 STYK1Q6J9G0 422 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 KLHL35Q6PF15 583 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 MAML3Q96JK9 1138 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 ZNF512Q96ME7 567 aaPredicted RBP24.23■■□□□ 1.47
SHD-201ENST00000543264 SLC2A11Q9BYW1 496 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 PTPRFP10586 1907 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 MDM4O15151 490 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 SULT2A1Q06520 285 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 LPIN1Q14693 890 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 SH3D19Q5HYK7 790 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 TMEM102Q8N9M5 508 aaPredicted RBP24.23■■□□□ 1.47
SHD-201ENST00000543264 GRIN3AQ8TCU5 1115 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 TMA16Q96EY4 203 aaKnown RBP24.23■■□□□ 1.47
SHD-201ENST00000543264 NUF2Q9BZD4 464 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 DTLQ9NZJ0 730 aa24.23■■□□□ 1.47
SHD-201ENST00000543264 RNF11Q9Y3C5 154 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms