RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 DKK4Q9UBT3 224 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 ADAMTS1Q9UHI8 967 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 FZD4Q9ULV1 537 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 NAALADL1Q9UQQ1 740 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 BTBD3Q9Y2F9 522 aa12.28□□□□□ -0.44
PTPN6-219ENST00000542848 EDDM13A0A1B0GTR0 161 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 LRRC72A6NJI9 287 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 PPP1R3GB7ZBB8 358 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 H0Y8X5 98 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 GNA14O95837 355 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 CALCAP01258 141 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 APOEP02649 317 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 HOXB3P14651 431 aaPredicted RBP12.27□□□□□ -0.45
PTPN6-219ENST00000542848 C21orf59P57076 290 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 ECT2LQ008S8 904 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 KCNH2Q12809 1159 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 SLC12A1Q13621 1099 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 CST6Q15828 149 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 SKOR2Q2VWA4 1001 aaPredicted RBP12.27□□□□□ -0.45
PTPN6-219ENST00000542848 INAVAQ3KP66 663 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 DCAF6Q58WW2 860 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 FSCBQ5H9T9 825 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 KCNT1Q5JUK3 1230 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 SYPL2Q5VXT5 272 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 TTI2Q6NXR4 508 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 ARHGEF19Q8IW93 802 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.45
PTPN6-219ENST00000542848 CFAP52Q8N1V2 620 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 FAM149B1Q96BN6 582 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 MYEOVQ96EZ4 313 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 OMDQ99983 421 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 ACE2Q9BYF1 805 aaPredicted RBP12.27□□□□□ -0.45
PTPN6-219ENST00000542848 NUCKS1Q9H1E3 243 aaKnown RBP12.27□□□□□ -0.45
PTPN6-219ENST00000542848 NEUROG2Q9H2A3 272 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 MAN1B1Q9UKM7 699 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 TPX2Q9ULW0 747 aaKnown RBP12.27□□□□□ -0.45
PTPN6-219ENST00000542848 ITIH6Q6UXX5 1313 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 LOC400499M0QZD8 3231 aa12.27□□□□□ -0.45
PTPN6-219ENST00000542848 ASXL3Q9C0F0 2248 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 A0A1B0GTQ1 180 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 A0A1W2PP55 124 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 FAM47DPA6NHR8 397 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 GOLGA8CPA6NN73 597 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 TTC34A8MYJ7 566 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 C10orf142B7Z368 130 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 CAPN9O14815 690 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MID1O15344 667 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MED7O43513 233 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 RNASEH2AO75792 299 aaKnown RBP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MOCS2O96007 188 aaPredicted RBP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 SLC8A1P32418 973 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 CCR5P51681 352 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MARSP56192 900 aaKnown RBP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 COL9A2Q14055 689 aaPredicted RBP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 SMAD1Q15797 465 aaKnown RBP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 KLHL10Q6JEL2 608 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 NCEH1Q6PIU2 408 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 LAYNQ6UX15 382 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MMS22LQ6ZRQ5 1243 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 SND1Q7KZF4 910 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 TMEM110Q86TL2 294 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 TAC4Q86UU9 113 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MMAAQ8IVH4 418 aaKnown RBP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 TRIM59Q8IWR1 403 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 LGI2Q8N0V4 545 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 OR2T34Q8NGX1 318 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MDM1Q8TC05 714 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 ADAM32Q8TC27 787 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 NELFBQ8WX92 580 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 ZNF606Q8WXB4 792 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 BTN2A3PQ96KV6 586 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 KREMEN1Q96MU8 473 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 MED15Q96RN5 788 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 FAM129BQ96TA1 746 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 ANP32EQ9BTT0 268 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 THAP9Q9H5L6 903 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 POPDC2Q9HBU9 364 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.26□□□□□ -0.45
PTPN6-219ENST00000542848 TJP2Q9UDY2 1190 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 SERGEFQ9UGK8 458 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 SLCO3A1Q9UIG8 710 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 TRPM6Q9BX84 2022 aa12.26□□□□□ -0.45
PTPN6-219ENST00000542848 TRABD2BA6NFA1 517 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 TRUB2O95900 331 aaKnown RBP12.25□□□□□ -0.45
PTPN6-219ENST00000542848 ADH1BP00325 375 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 IGLV3-25P01717 112 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 AFPP02771 609 aaKnown RBP12.25□□□□□ -0.45
PTPN6-219ENST00000542848 KRT5P13647 590 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 GOT1P17174 413 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 TACR2P21452 398 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 C5AR1P21730 350 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 BMP6P22004 513 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 CD38P28907 300 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 NNMTP40261 264 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 CTSOP43234 321 aaPredicted RBP12.25□□□□□ -0.45
PTPN6-219ENST00000542848 YWHAZP63104 245 aaKnown RBP12.25□□□□□ -0.45
PTPN6-219ENST00000542848 SULT2A1Q06520 285 aa12.25□□□□□ -0.45
PTPN6-219ENST00000542848 EIF4EBP2Q13542 120 aaPredicted RBP12.25□□□□□ -0.45
PTPN6-219ENST00000542848 MORC3Q14149 939 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms