RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 GOLGA6L19H0YKK7 550 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 NPC1O15118 1278 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 CCP110O43303 1012 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 GYPCP04921 128 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 EPHX1P07099 455 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 PLEKP08567 350 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 DLDP09622 509 aaKnown RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 PDGFRAP16234 1089 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 PTPN9P43378 593 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 STK19P49842 368 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 HDAC4P56524 1084 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 RPL7AP62424 266 aaKnown RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 TPM4P67936 248 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 FNDC3BQ53EP0 1204 aaKnown RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 USP39Q53GS9 565 aaKnown RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 RABGAP1LQ5R372 815 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 SDE2Q6IQ49 451 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 ACAD10Q6JQN1 1059 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 WDR59Q6PJI9 974 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 SERPINA13PQ6UXR4 307 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 PGBD3Q8N328 593 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 CCDC185Q8N715 623 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 RNF214Q8ND24 703 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 CENPIQ92674 756 aaPredicted RBP11.88□□□□□ -0.51
C2CD3-217ENST00000542452 ALG14Q96F25 216 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 MCEEQ96PE7 176 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 SELENOOQ9BVL4 669 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 EDEM3Q9BZQ6 932 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 ARRDC1-AS1Q9H2J1 176 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 TSPY26PQ9H489 355 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 WDCPQ9H6R7 721 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 SLC12A6Q9UHW9 1150 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 CYP8B1Q9UNU6 501 aa11.88□□□□□ -0.51
C2CD3-217ENST00000542452 DMXL1Q9Y485 3027 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 PCDH15Q96QU1 1955 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 DNAH14Q0VDD8 3507 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 IGLV3-10A0A075B6K4 115 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 E9PAM4 449 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 F9P00740 461 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 KRT3P12035 628 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 POLR2EP19388 210 aaKnown RBP11.87□□□□□ -0.51
C2CD3-217ENST00000542452 TNFAIP3P21580 790 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 GPD1P21695 349 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 SDC4P31431 198 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 ZNF252P-AS1Q0IIN9 211 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 CAMK2GQ13555 558 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-217ENST00000542452 STARD3Q14849 445 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 MANEALQ5VSG8 457 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 TTC39BQ5VTQ0 682 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-217ENST00000542452 TCEAL6Q6IPX3 200 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 DNAJC24Q6P3W2 148 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 ARMCX6Q7L4S7 300 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 ZNF557Q8N988 423 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-217ENST00000542452 FAM172AQ8WUF8 416 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 TCEAL3Q969E4 200 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 LOXL4Q96JB6 756 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 PSMB7Q99436 277 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 PRSS16Q9NQE7 514 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 SEMA4GQ9NTN9 838 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 MPP6Q9NZW5 540 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 KIAA1522Q9P206 1035 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-217ENST00000542452 USP36Q9P275 1121 aaKnown RBP11.87□□□□□ -0.51
C2CD3-217ENST00000542452 USP18Q9UMW8 372 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 ERVW-1Q9UQF0 538 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 OR51B4Q9Y5P0 310 aa11.87□□□□□ -0.51
C2CD3-217ENST00000542452 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.87□□□□□ -0.51
C2CD3-217ENST00000542452 ITIH6Q6UXX5 1313 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 ATXN2Q99700 1313 aaKnown RBP11.86□□□□□ -0.51
C2CD3-217ENST00000542452 ADAMTS9Q9P2N4 1935 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 SIGLEC16A6NMB1 481 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 DRGXA6NNA5 263 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 TTC34A8MYJ7 566 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 FAM72CH0Y354 149 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 AP5Z1O43299 807 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 TIMM44O43615 452 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 SIN3BO75182 1162 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 ASLP04424 464 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 CCDC172P0C7W6 258 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 C7P10643 843 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 MPLP40238 635 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 PTGER3P43115 390 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 CDH4P55283 916 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 KLHL30Q0D2K2 578 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 SF3A2Q15428 464 aaKnown RBP11.86□□□□□ -0.51
C2CD3-217ENST00000542452 FAM72AQ5TYM5 149 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 PLEKHA7Q6IQ23 1121 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 FAM72DQ6L9T8 149 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 SND1Q7KZF4 910 aaKnown RBP eCLIP11.86□□□□□ -0.51
C2CD3-217ENST00000542452 STRADAQ7RTN6 431 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 FAM72BQ86X60 149 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 SLC41A1Q8IVJ1 513 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 TMEFF1Q8IYR6 380 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 DEFB119Q8N690 84 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 OR2T3Q8NH03 318 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 SPACA7Q96KW9 195 aa11.86□□□□□ -0.51
C2CD3-217ENST00000542452 RPL10LQ96L21 214 aaKnown RBP11.86□□□□□ -0.51
C2CD3-217ENST00000542452 TRIM7Q9C029 511 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms