RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 ZNF333Q96JL9 665 aa17.7■□□□□ 0.42
TMEM50B-210ENST00000542230 TOX2Q96NM4 488 aa17.7■□□□□ 0.42
TMEM50B-210ENST00000542230 CYTH2Q99418 400 aa17.7■□□□□ 0.42
TMEM50B-210ENST00000542230 EBNA1BP2Q99848 306 aaKnown RBP17.7■□□□□ 0.42
TMEM50B-210ENST00000542230 TMEM175Q9BSA9 504 aa17.7■□□□□ 0.42
TMEM50B-210ENST00000542230 SLC39A8Q9C0K1 460 aa17.7■□□□□ 0.42
TMEM50B-210ENST00000542230 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.7■□□□□ 0.42
TMEM50B-210ENST00000542230 FAM92AA1XBS5 289 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 CNTN5O94779 1100 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 EFEMP2O95967 443 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 CPP00450 1065 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 F7P08709 466 aaPredicted RBP17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 ACRP10323 421 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 CSF2RAP15509 400 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 KRT4P19013 534 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 RPA3P35244 121 aaPredicted RBP17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 PPP2R5DQ14738 602 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 PARP6Q2NL67 630 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 C10orf120Q5SQS8 335 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 TFAP2DQ7Z6R9 452 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 CTAGE3PQ8IX95 158 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 RIBC1Q8N443 379 aaPredicted RBP17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 PPM1NQ8N819 430 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 AUTS2Q8WXX7 1259 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 HDAC11Q96DB2 347 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 IGSF21Q96ID5 467 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 PRDM16Q9HAZ2 1276 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 GRID1Q9ULK0 1009 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 PLXNA3P51805 1871 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 STK10O94804 968 aaKnown RBP17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 SEC24AO95486 1093 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 NFKB1P19838 968 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 FDFT1P37268 417 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 MLLT6P55198 1093 aaPredicted RBP17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 TBX4P57082 545 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 CASC4Q6P4E1 433 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 ANKS3Q6ZW76 656 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 PDZD4Q76G19 769 aaPredicted RBP17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 OR52K1Q8NGK4 314 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 ARNTL2Q8WYA1 636 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 SERPINB11Q96P15 392 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 TRIM62Q9BVG3 475 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 TLR6Q9Y2C9 796 aa17.69■□□□□ 0.42
TMEM50B-210ENST00000542230 TRIM43BA6NCK2 446 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 KLHL38Q2WGJ6 581 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 ALFQ53S48 1182 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 C4orf22Q6V702 233 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 CIR1Q86X95 450 aaPredicted RBP17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 SPPL2BQ8TCT7 592 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 TRIM43Q96BQ3 446 aaPredicted RBP17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 CHMP6Q96FZ7 201 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 PAIP2Q9BPZ3 127 aaKnown RBP17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 CLSTN3Q9BQT9 956 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 PRDM5Q9NQX1 630 aaPredicted RBP17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 IGSF9Q9P2J2 1179 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 GOLGA6L7A0A1B0GV03 622 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 CSH1P0DML2 217 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 CSH2P0DML3 217 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 TEX44Q53QW1 395 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 SPOUT1Q5T280 376 aaKnown RBP17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 MSANTD2Q6P1R3 559 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 SPATA22Q8NHS9 363 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 DYDC1Q8WWB3 177 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 SLC44A1Q8WWI5 657 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 TBC1D31Q96DN5 1066 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 SERAC1Q96JX3 654 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 PKNOX2Q96KN3 472 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 NOL6Q9H6R4 1146 aaKnown RBP17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 SYBUQ9NX95 663 aa17.68■□□□□ 0.42
TMEM50B-210ENST00000542230 APOEP02649 317 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 ATP2A2P16615 1042 aaKnown RBP17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 HOXC13P31276 330 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 FOXN2P32314 431 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 SERPINB6P35237 376 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 KCNQ1P51787 676 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 ELAVL2Q12926 359 aaKnown RBP17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 SLC1A5Q15758 541 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 USP41Q3LFD5 358 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 MS4A13Q5J8X5 152 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 SPOCK2Q92563 424 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 IGSF8Q969P0 613 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 OXNAD1Q96HP4 312 aaPredicted RBP17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 ZMYND15Q9H091 742 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 XAB2Q9HCS7 855 aaKnown RBP17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 MARCH2Q9P0N8 246 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 SLC12A8A0AV02 714 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 SLC38A8A6NNN8 435 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 TCP11X1B4DZS4 312 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 MAFKO60675 156 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 CBLBQ13191 982 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 BMPR2Q13873 1038 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 LRRC8BQ6P9F7 803 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 CNKSR3Q6P9H4 555 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 ZNF683Q8IZ20 524 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 DENND1AQ8TEH3 1009 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 TOP1MTQ969P6 601 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 FRMD8Q9BZ67 464 aaPredicted RBP17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 MTRRQ9UBK8 725 aa17.67■□□□□ 0.42
TMEM50B-210ENST00000542230 FAM47DPA6NHR8 397 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms