RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SPAG6O75602 509 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CAPN15O75808 1086 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 TOP3BO95985 862 aaKnown RBP17.63■□□□□ 0.41
SPIDR-227ENST00000541342 PRKCHP24723 683 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CCNFP41002 786 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 TKTL1P51854 596 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 C11orf91Q3C1V1 193 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 C1orf228Q6PIY5 440 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 PLD5Q8N7P1 536 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 PCDH19Q8TAB3 1148 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 FAM149B1Q96BN6 582 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 MTMR10Q9NXD2 777 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 NLRC5Q86WI3 1866 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CCDC195A0A1B0GUA6 201 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 B2RBV5 119 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 M0QZQ0 153 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 ARVCFO00192 962 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 NRP1O14786 923 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CYP11A1P05108 521 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 ENO1P06733 434 aaKnown RBP17.63■□□□□ 0.41
SPIDR-227ENST00000541342 FESP07332 822 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CSH1P0DML2 217 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CSH2P0DML3 217 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 YY1P25490 414 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 L1CAMP32004 1257 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CLLU1OSQ5K130 101 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 RNF220Q5VTB9 566 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 CTU1Q7Z7A3 348 aaKnown RBP17.63■□□□□ 0.41
SPIDR-227ENST00000541342 SHKBP1Q8TBC3 707 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 LRRC4Q9HBW1 653 aa17.63■□□□□ 0.41
SPIDR-227ENST00000541342 MAP3K6O95382 1288 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 MXRA7P84157 204 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 PPP6R3Q5H9R7 873 aaPredicted RBP17.62■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF280BQ86YH2 543 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 ARID3BQ8IVW6 561 aaPredicted RBP17.62■□□□□ 0.41
SPIDR-227ENST00000541342 MAP7D3Q8IWC1 876 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 CTAGE3PQ8IX95 158 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 PDCD7Q8N8D1 485 aaKnown RBP17.62■□□□□ 0.41
SPIDR-227ENST00000541342 RSPH1Q8WYR4 309 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 RTP4Q96DX8 246 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 TMEM209Q96SK2 561 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.62■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF180Q9UJW8 692 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 PTPRDP23468 1912 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 HHLA1C9JL84 531 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 DAB1O75553 588 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 DESP17661 470 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SATB1Q01826 763 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SLC25A52Q3SY17 297 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 DCAF6Q58WW2 860 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SYPL2Q5VXT5 272 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 MYLPFQ96A32 169 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 PANX3Q96QZ0 392 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SLC13A1Q9BZW2 595 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 TMLHEQ9NVH6 421 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 MARCOQ9UEW3 520 aaPredicted RBP17.62■□□□□ 0.41
SPIDR-227ENST00000541342 PHF24Q9UPV7 400 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 MAGEC1O60732 1142 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 DDHD2O94830 711 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SNRPAP09012 282 aaKnown RBP17.62■□□□□ 0.41
SPIDR-227ENST00000541342 PCSK1P29120 753 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 ERFP50548 548 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 DPYSL2Q16555 572 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SLC9A4Q6AI14 798 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SLC24A5Q71RS6 500 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 STRADAQ7RTN6 431 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 BNIPLQ7Z465 357 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 SIX6OS1Q8N1H7 587 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 OR10T2Q8NGX3 314 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 GATA6Q92908 595 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 NT5C3BQ969T7 300 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 FAM161BQ96MY7 647 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 PKMYT1Q99640 499 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 ULBP1Q9BZM6 244 aa17.62■□□□□ 0.41
SPIDR-227ENST00000541342 ZC3H7BQ9UGR2 993 aaKnown RBP17.62■□□□□ 0.41
SPIDR-227ENST00000541342 KCNN4O15554 427 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 SNNO75324 88 aaPredicted RBP17.61■□□□□ 0.41
SPIDR-227ENST00000541342 FYNP06241 537 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 SULT1E1P49888 294 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 TFDP2Q14188 446 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 CHI3L2Q15782 390 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 RAB41Q5JT25 222 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 FAM171BQ6P995 826 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 TRMT10BQ6PF06 316 aaKnown RBP17.61■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF534Q76KX8 674 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 KCTD15Q96SI1 283 aaPredicted RBP17.61■□□□□ 0.41
SPIDR-227ENST00000541342 ACBD6Q9BR61 282 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF670Q9BS34 389 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 CCDC106Q9BWC9 280 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 AP4E1Q9UPM8 1137 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 H7C0C1 242 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 KITP10721 976 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 RBL1P28749 1068 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 ATP5OP48047 213 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 TMPRSS15P98073 1019 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 LRRTM3Q86VH5 581 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 FAM131BQ86XD5 332 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 TMPRSS6Q8IU80 811 aa17.61■□□□□ 0.41
SPIDR-227ENST00000541342 PYROXD2Q8N2H3 581 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms