RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 PSG1P11464 419 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 RCAN1P53805 252 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 KRTAP1-1Q07627 177 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 FOXO1Q12778 655 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 BLMHQ13867 455 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 RPS6KA2Q15349 733 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 C10orf76Q5T2E6 689 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 TTC22Q5TAA0 569 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 TTLL5Q6EMB2 1281 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 SULT6B1Q6IMI4 303 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 ERAP2Q6P179 960 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 LRIG3Q6UXM1 1119 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 COLCA1Q6ZS62 124 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 MDGA2Q7Z553 956 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 TECPR1Q7Z6L1 1165 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 KAT2AQ92830 837 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 EME1Q96AY2 570 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 ADAD1Q96M93 576 aaKnown RBP6.72□□□□□ -1.33
YBX3-210ENST00000540975 ZBTB40Q9NUA8 1239 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 DECR2Q9NUI1 292 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 C19orf53Q9UNZ5 99 aaPredicted RBP6.72□□□□□ -1.33
YBX3-210ENST00000540975 SLC8A2Q9UPR5 921 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 TNFSF13BQ9Y275 285 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 TTC3P53804 2025 aa6.72□□□□□ -1.33
YBX3-210ENST00000540975 IGLV5-39A0A0G2JS06 123 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 HEXIM1O94992 359 aaKnown RBP6.71□□□□□ -1.34
YBX3-210ENST00000540975 EPN2O95208 641 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 TNFRSF1BP20333 461 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 ALDH7A1P49419 539 aaKnown RBP6.71□□□□□ -1.34
YBX3-210ENST00000540975 TRIM14Q14142 442 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 GALNTL6Q49A17 601 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 TANGO2Q6ICL3 276 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 B4GALNT4Q76KP1 1039 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 RTL10Q7L3V2 364 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 CPT1BQ92523 772 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 IP6K1Q92551 441 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 CLMNQ96JQ2 1002 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 WDR83Q9BRX9 315 aaKnown RBP6.71□□□□□ -1.34
YBX3-210ENST00000540975 DDX23Q9BUQ8 820 aaKnown RBP6.71□□□□□ -1.34
YBX3-210ENST00000540975 MAGEH1Q9H213 219 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 ABHD16BQ9H3Z7 469 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 DTX4Q9Y2E6 619 aa6.71□□□□□ -1.34
YBX3-210ENST00000540975 TMEM272A0A1B0GTI8 110 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 KCNJ18B7U540 433 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 MCIDASD6RGH6 385 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 NTN1O95631 604 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 OS9Q13438 667 aaPredicted RBP6.7□□□□□ -1.34
YBX3-210ENST00000540975 KRT72Q14CN4 511 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 INPP5JQ15735 1006 aaPredicted RBP6.7□□□□□ -1.34
YBX3-210ENST00000540975 GPR162Q16538 588 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 CCDC174Q6PII3 467 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 KIAA1324Q6UXG2 1013 aaKnown RBP6.7□□□□□ -1.34
YBX3-210ENST00000540975 CYB5R4Q7L1T6 521 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 DDIASQ8IXT1 998 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 SLC25A28Q96A46 364 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 C3orf49Q96BT1 292 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 TRAPPC9Q96Q05 1148 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 SEPSECSQ9HD40 501 aaKnown RBP6.7□□□□□ -1.34
YBX3-210ENST00000540975 GRHPRQ9UBQ7 328 aa6.7□□□□□ -1.34
YBX3-210ENST00000540975 H3BNX3 289 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 RHODO00212 210 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 CYP21A2P08686 494 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 PCP4P48539 62 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 POLGP54098 1239 aaPredicted RBP6.69□□□□□ -1.34
YBX3-210ENST00000540975 LINC00205P59089 165 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 DCTN1Q14203 1278 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 TUBB8Q3ZCM7 444 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 RINLQ6ZS11 566 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 RRAGAQ7L523 313 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 TMEM200AQ86VY9 491 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 ENAHQ8N8S7 591 aaPredicted RBP6.69□□□□□ -1.34
YBX3-210ENST00000540975 C9orf106Q8NAJ2 232 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 NSMCE1Q8WV22 266 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 NLRP4Q96MN2 994 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 RPS6KC1Q96S38 1066 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 PDE11AQ9HCR9 933 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 SPAG4Q9NPE6 437 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 NDUFAF4Q9P032 175 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 FBXO4Q9UKT5 387 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 BAG5Q9UL15 447 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 SQORQ9Y6N5 450 aa6.69□□□□□ -1.34
YBX3-210ENST00000540975 CXorf65A6NEN9 183 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 CD8B2A6NJW9 211 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 A6NNC1 897 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 FOXO6A8MYZ6 492 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 ZC3H11AO75152 810 aaKnown RBP eCLIP6.68□□□□□ -1.343e-8■■□□□ 13.7
YBX3-210ENST00000540975 CRYABP02511 175 aaKnown RBP6.68□□□□□ -1.34
YBX3-210ENST00000540975 CHRNB1P11230 501 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 HOXB9P17482 250 aaPredicted RBP6.68□□□□□ -1.34
YBX3-210ENST00000540975 SERPINA4P29622 427 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 BIRC2Q13490 618 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 TTC39AQ5SRH9 613 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 C6orf10Q5SRN2 563 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 ENDOVQ8N8Q3 282 aaKnown RBP6.68□□□□□ -1.34
YBX3-210ENST00000540975 FAM110DQ8TAY7 271 aaPredicted RBP6.68□□□□□ -1.34
YBX3-210ENST00000540975 SLC2A12Q8TD20 617 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 TMEM174Q8WUU8 243 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 CENPIQ92674 756 aaPredicted RBP6.68□□□□□ -1.34
YBX3-210ENST00000540975 FZD3Q9NPG1 666 aa6.68□□□□□ -1.34
YBX3-210ENST00000540975 MSI1O43347 362 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms