RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 PPM1LQ5SGD2 360 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 FUT10Q6P4F1 479 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 UNC5AQ6ZN44 842 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 OSTM1Q86WC4 334 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 SPATS2Q86XZ4 545 aaKnown RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 TNS4Q8IZW8 715 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 ALLCQ8N6M5 410 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 DQX1Q8TE96 717 aaKnown RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 SPDL1Q96EA4 605 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 BORCS6Q96GS4 357 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 THTPAQ9BU02 230 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 MRPL9Q9BYD2 267 aaKnown RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 SENP1Q9P0U3 644 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 ARMCX1Q9P291 453 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 HAO1Q9UJM8 370 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 AAR2Q9Y312 384 aaKnown RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 E9PBE3 544 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 KLHL41O60662 606 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 OPHN1O60890 802 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 LCA5LO95447 670 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 RPL9P32969 192 aaKnown RBP9.76□□□□□ -0.85
TTC39C-203ENST00000540918 GRIA1P42261 906 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CDKN2BP42772 138 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MAP3K10Q02779 954 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 HECTD3Q5T447 861 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 FOXR2Q6PJQ5 311 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CMC1Q7Z7K0 106 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 KCNMB4Q86W47 210 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 SLC26A7Q8TE54 656 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 NUF2Q9BZD4 464 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CXCL16Q9H2A7 254 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 LRRC19Q9H756 370 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CAB39LQ9H9S4 337 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MID2Q9UJV3 735 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MFHAS1Q9Y4C4 1052 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 COL1A2P08123 1366 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 SMIM24O75264 130 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 LRIG2O94898 1065 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 ESRRBO95718 433 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 RENBPP51606 427 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CNGA3Q16281 694 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 SLC25A52Q3SY17 297 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 TMEM259Q4ZIN3 620 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 ARHGAP15Q53QZ3 475 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 N4BP2L1Q5TBK1 243 aaPredicted RBP9.76□□□□□ -0.85
TTC39C-203ENST00000540918 TRPM8Q7Z2W7 1104 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 LRRC43Q8N309 656 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 FIBCD1Q8N539 461 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 TOP6BLQ8N6T0 577 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 KCTD15Q96SI1 283 aaPredicted RBP9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MYOCQ99972 504 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 TBC1D13Q9NVG8 400 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MIOSQ9NXC5 875 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 SUN2Q9UH99 717 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 PNMA8BQ9ULN7 279 aaPredicted RBP9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MAP2K7O14733 419 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 NRP1O14786 923 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CCL16O15467 120 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 EDNRBP24530 442 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 AUHQ13825 339 aaKnown RBP9.76□□□□□ -0.85
TTC39C-203ENST00000540918 UGP2Q16851 508 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 TAC4Q86UU9 113 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 C7orf61Q8IZ16 206 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 FUKQ8N0W3 1084 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MECRQ9BV79 373 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 FBXO6Q9NRD1 293 aaPredicted RBP9.76□□□□□ -0.85
TTC39C-203ENST00000540918 MORF4L1Q9UBU8 362 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 PCYOX1Q9UHG3 505 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 CACNA1SQ13698 1873 aa9.76□□□□□ -0.85
TTC39C-203ENST00000540918 C2orf81A6NN90 581 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 B2RBV5 119 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 BEST1O76090 585 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 MMP13P45452 471 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 AQP5P55064 265 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 CDH17Q12864 832 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 KDM7AQ6ZMT4 941 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 RD3Q7Z3Z2 195 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 RNF148Q8N7C7 305 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PCDH19Q8TAB3 1148 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 RPL10LQ96L21 214 aaKnown RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 LHX5Q9H2C1 402 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 CNGB3Q9NQW8 809 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 SLC17A6Q9P2U8 582 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 ADAMTS5Q9UNA0 930 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 C2CD4BA6NLJ0 364 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 GNGT2O14610 69 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 TBL1XO60907 577 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 STMN1P16949 149 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 SERPINB5P36952 375 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 LRRC73Q5JTD7 316 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 RGS9BPQ6ZS82 235 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 ANKS1BQ7Z6G8 1248 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 LINC00523Q86TU6 105 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 MTDHQ86UE4 582 aaKnown RBP9.75□□□□□ -0.85
TTC39C-203ENST00000540918 SPATA24Q86W54 205 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 ECHDC2Q86YB7 292 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 POU5F2Q8N7G0 328 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PIP4K2CQ8TBX8 421 aa9.75□□□□□ -0.85
TTC39C-203ENST00000540918 PPP2R3CQ969Q6 453 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms