RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 FAM170AA1A519 330 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 EPHB6O15197 1021 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 PAGE1O75459 146 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 SRPRAP08240 638 aaKnown RBP17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 NNMTP40261 264 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 PI4KAP42356 2102 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 CXCR3P49682 368 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 IRX4P78413 519 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 AUHQ13825 339 aaKnown RBP17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 DUOXA1Q1HG43 343 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 UAP1L1Q3KQV9 507 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 PLEKHG6Q3KR16 790 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 SLC25A52Q3SY17 297 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 WDR45BQ5MNZ6 344 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 DAB2IPQ5VWQ8 1189 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 FBXL22Q6P050 247 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 MMS22LQ6ZRQ5 1243 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 PGAP3Q96FM1 320 aaPredicted RBP17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 ZNF419Q96HQ0 510 aaPredicted RBP17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 TKTL2Q9H0I9 626 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 SIK2Q9H0K1 926 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 PRSS16Q9NQE7 514 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 PIGVQ9NUD9 493 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 TMEM74BQ9NUR3 256 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 WSB2Q9NYS7 404 aaPredicted RBP17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 INTS6Q9UL03 887 aaKnown RBP17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 VANGL2Q9ULK5 521 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 ERVW-1Q9UQF0 538 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 HS3ST4Q9Y661 456 aa17.7■□□□□ 0.42
CACNA2D4-211ENST00000540728 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 RNASEH1O60930 286 aaKnown RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 DNTTP04053 509 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 CYP1A1P04798 512 aaPredicted RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 CCDC172P0C7W6 258 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 NOVA1P51513 510 aaKnown RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 ECT2LQ008S8 904 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 FMO1Q01740 532 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 ZBTB16Q05516 673 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 SULT2A1Q06520 285 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 ZNF177Q13360 481 aaPredicted RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 TTC31Q49AM3 519 aaPredicted RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 FILIP1LQ4L180 1135 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 C2CD6Q53TS8 623 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 ACBD5Q5T8D3 534 aaPredicted RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 PEAR1Q5VY43 1037 aaPredicted RBP17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 PSAPL1Q6NUJ1 521 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 SLC23A3Q6PIS1 610 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 ARCQ7LC44 396 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 SLC41A1Q8IVJ1 513 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 NT5C3BQ969T7 300 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 TBCBQ99426 244 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 GPR174Q9BXC1 333 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 ARHGEF38Q9NXL2 777 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 SUSD2Q9UGT4 822 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 SLC6A14Q9UN76 642 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 CHD8Q9HCK8 2581 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 ACACBO00763 2458 aa17.69■□□□□ 0.42
CACNA2D4-211ENST00000540728 MUC22E2RYF6 1773 aaPredicted RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 MEI4A8MW99 385 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 CLDN11O75508 207 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 IGLV3-19P01714 112 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 ATP1A3P13637 1013 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 GNSP15586 552 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 PDGFRAP16234 1089 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 CHRNB2P17787 502 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 ENGP17813 658 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 FLT3P36888 993 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 NSFP46459 744 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 ZNF165P49910 485 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 ATXN3P54252 364 aaPredicted RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 GFPT1Q06210 699 aaPredicted RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 SFSWAPQ12872 951 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 HNRNPA1L2Q32P51 320 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 ZNF776Q68DI1 518 aaPredicted RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 LRSAM1Q6UWE0 723 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 LRRC31Q6UY01 552 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 APTXQ7Z2E3 356 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 CIR1Q86X95 450 aaPredicted RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 APCDD1Q8J025 514 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 CADM4Q8NFZ8 388 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 IGSF8Q969P0 613 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 GTPBP2Q9BX10 602 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 HSD3B7Q9H2F3 369 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 FSCN3Q9NQT6 498 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 SEPT11Q9NVA2 429 aaKnown RBP17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 TMEM59LQ9UK28 342 aa17.68■□□□□ 0.42
CACNA2D4-211ENST00000540728 TPRP12270 2363 aaKnown RBP17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 EDDM13A0A1B0GTR0 161 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 TARSL2A2RTX5 802 aaKnown RBP17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 KCNK5O95279 499 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 ADCY5O95622 1261 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 SERPINF2P08697 491 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 TFE3P19532 575 aaPredicted RBP17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 MMP8P22894 467 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 PLK1P53350 603 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 CENPCQ03188 943 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 ARID5BQ14865 1188 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 OTUD1Q5VV17 481 aaPredicted RBP17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 FAM124AQ86V42 546 aa17.67■□□□□ 0.42
CACNA2D4-211ENST00000540728 SLC30A5Q8TAD4 765 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms