RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 CDC23Q9UJX2 597 aa4.08□□□□□ -1.76
MDM2-227ENST00000540709 MAGED2Q9UNF1 606 aaPredicted RBP4.08□□□□□ -1.76
MDM2-227ENST00000540709 LOC105369274A0A096LPK9 316 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 LOC102723532A0A0G2JNH3 316 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 AQP12BA6NM10 295 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 FOXO6A8MYZ6 492 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 ASNA1O43681 348 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 NPPBP16860 134 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 ARRB2P32121 409 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 MLH1P40692 756 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 TM4SF4P48230 202 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 HLTFQ14527 1009 aaKnown RBP eCLIP4.07□□□□□ -1.76
MDM2-227ENST00000540709 STARD3Q14849 445 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 BTBD16Q32M84 506 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 HSP90AB2PQ58FF8 381 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 TTLL5Q6EMB2 1281 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
MDM2-227ENST00000540709 CCDC25Q86WR0 208 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 NRSN1Q8IZ57 195 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 OR4N4Q8N0Y3 316 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 PAQR4Q8N4S7 273 aaPredicted RBP4.07□□□□□ -1.76
MDM2-227ENST00000540709 CLEC4CQ8WTT0 213 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 HMGB4Q8WW32 186 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 INPP5DQ92835 1189 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 NEUROG1Q92886 237 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 TMEM120AQ9BXJ8 343 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 BRD8Q9H0E9 1235 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 SIRT3Q9NTG7 399 aaPredicted RBP4.07□□□□□ -1.76
MDM2-227ENST00000540709 SLC52A1Q9NWF4 448 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 TBC1D14Q9P2M4 693 aa4.07□□□□□ -1.76
MDM2-227ENST00000540709 GXYLT2A0PJZ3 443 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 AGAP5A6NIR3 686 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 C3orf70A6NLC5 250 aaPredicted RBP4.06□□□□□ -1.76
MDM2-227ENST00000540709 CYP1A2P05177 515 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 MYL1P05976 194 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 CPA1P15085 419 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 KLRC2P26717 231 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 TECP42680 631 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 TMPRSS3P57727 454 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 FAM3BP58499 235 aaPredicted RBP4.06□□□□□ -1.76
MDM2-227ENST00000540709 TLE3Q04726 772 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 ENTPD8Q5MY95 495 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 TMEM88Q6PEY1 159 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 GATAD2AQ86YP4 633 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 GPSM1Q86YR5 675 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 FAM186BQ8IYM0 893 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 C7orf57Q8NEG2 295 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 ATP2A3Q93084 1043 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 CLMNQ96JQ2 1002 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 STK33Q9BYT3 514 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 ZNF304Q9HCX3 659 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 SEPSECSQ9HD40 501 aaKnown RBP4.06□□□□□ -1.76
MDM2-227ENST00000540709 SPAG4Q9NPE6 437 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 HIF1ANQ9NWT6 349 aa4.06□□□□□ -1.76
MDM2-227ENST00000540709 PRC1O43663 620 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 SLC28A2O43868 658 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 TNFRSF6BO95407 300 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 IFNA2P01563 188 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 GYS1P13807 737 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 PLA2G2AP14555 144 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 TNFRSF8P28908 595 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 CHRNA5P30532 468 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 ENTPD1P49961 510 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 FOXL2P58012 376 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 RBM6P78332 1123 aaKnown RBP4.05□□□□□ -1.76
MDM2-227ENST00000540709 ZXDBP98169 803 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 SF3A3Q12874 501 aaKnown RBP eCLIP4.05□□□□□ -1.76
MDM2-227ENST00000540709 ERAP2Q6P179 960 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 PARM1Q6UWI2 310 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 SLC16A12Q6ZSM3 486 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 MDGA2Q7Z553 956 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 KLBQ86Z14 1044 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 FAM217AQ8IXS0 508 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 SMRP1Q8NCR6 262 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 STYXQ8WUJ0 223 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 SGCZQ96LD1 299 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 MAGEH1Q9H213 219 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 SLCO5A1Q9H2Y9 848 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 ARFGAP3Q9NP61 516 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 GEMIN8Q9NWZ8 242 aaKnown RBP4.05□□□□□ -1.76
MDM2-227ENST00000540709 ARL15Q9NXU5 204 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 NCKIPSDQ9NZQ3 722 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 MYO6Q9UM54 1294 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 ZBTB1Q9Y2K1 713 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 PCDHA10Q9Y5I2 948 aa4.05□□□□□ -1.76
MDM2-227ENST00000540709 A0A1B0GVT2 93 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 TCRBV7S3A2A0A539 114 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 MDM4O15151 490 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 NEURL1O76050 574 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 ACAA1P09110 424 aaPredicted RBP4.04□□□□□ -1.76
MDM2-227ENST00000540709 GPR18Q14330 331 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 RPS6KA2Q15349 733 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 ANKS1BQ7Z6G8 1248 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 IQCF1Q8N6M8 205 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 TMEM217Q8N7C4 229 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 CMASQ8NFW8 434 aaPredicted RBP4.04□□□□□ -1.76
MDM2-227ENST00000540709 DEPTORQ8TB45 409 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 NUDCD2Q8WVJ2 157 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 MIB2Q96AX9 1013 aa4.04□□□□□ -1.76
MDM2-227ENST00000540709 MED30Q96HR3 178 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms