RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 RABGAP1LQ5R372 815 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CCDC181Q5TID7 509 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NCBP2-AS2Q69YL0 99 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TRIM68Q6AZZ1 485 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MFSD6LQ8IWD5 586 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ZFYVE19Q96K21 471 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 CATSPERBQ9H7T0 1116 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NDFIP2Q9NV92 336 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DUS2Q9NX74 493 aaKnown RBP19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ZNF212Q9UDV6 495 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NR2E1Q9Y466 385 aa19.47■□□□□ 0.71
TNFRSF1A-213ENST00000540022 HELZP42694 1942 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 WASH4PA8MWX3 477 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ANHXE9PGG2 379 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ECI2O75521 394 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ASGR2P07307 311 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 IFNAR2P48551 515 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 FCHO2Q0JRZ9 810 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 HTR4Q13639 388 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TUBB2AQ13885 445 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 GRM2Q14416 872 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 SIX1Q15475 284 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MTSS1LQ765P7 747 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TFAP2DQ7Z6R9 452 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TMEM25Q86YD3 366 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RTL3Q8N8U3 475 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 BHMTQ93088 406 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TUBB2BQ9BVA1 445 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 SPHK2Q9NRA0 654 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TMEM248Q9NWD8 314 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 SAE1Q9UBE0 346 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 RNF14Q9UBS8 474 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NUMBLQ9Y6R0 609 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NUP210Q8TEM1 1887 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 TBL1XO60907 577 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PECAM1P16284 738 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PSMC3P17980 439 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PAFAH1B1P43034 410 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 WHAMMP3Q1A5X7 153 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 EML3Q32P44 896 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 MPPE1Q53F39 396 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 LY6G5CQ5SRR4 150 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NPNTQ6UXI9 565 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 NPWQ8N729 165 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 HJURPQ8NCD3 748 aaPredicted RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 DDI1Q8WTU0 396 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 IRF7Q92985 503 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 HAUS1Q96CS2 278 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 FAM83CQ9BQN1 747 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 KLC2Q9H0B6 622 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 PRDM16Q9HAZ2 1276 aa19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 THG1LQ9NWX6 298 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1A-213ENST00000540022 ZNF318Q5VUA4 2279 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ARSAP15289 507 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ZFXP17010 805 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 COL9A1P20849 921 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CDH4P55283 916 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 GBE1Q04446 702 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 SLC10A2Q12908 348 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 PAFAH1B3Q15102 231 aaKnown RBP19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TTC39BQ5VTQ0 682 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 FYB2Q5VWT5 728 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 C1orf228Q6PIY5 440 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 RHBDF2Q6PJF5 856 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TMCO3Q6UWJ1 677 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NETO2Q8NC67 525 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 DEPDC1BQ8WUY9 529 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 NAP1L3Q99457 506 aaPredicted RBP19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 AP1M1Q9BXS5 423 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 PLK2Q9NYY3 685 aa19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 R3HDM2Q9Y2K5 976 aaKnown RBP19.45■□□□□ 0.7
TNFRSF1A-213ENST00000540022 A0A1B0GVM2 712 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TCAF2A6NFQ2 919 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 APOC4-APOC2K7ER74 178 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 MFSD11O43934 449 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CLDN11O75508 207 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 MAP3K6O95382 1288 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 APOC2P02655 101 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CYBBP04839 570 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CYP17A1P05093 508 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TGM2P21980 687 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 HOXD9P28356 352 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 DHCR24Q15392 516 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 MPP7Q5T2T1 576 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 CHST9Q7L1S5 443 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TP53INP2Q8IXH6 220 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 FAM118BQ9BPY3 351 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 EBF3Q9H4W6 596 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 L2HGDHQ9H9P8 463 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 KCNK12Q9HB15 430 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 HEY1Q9Y5J3 304 aa19.44■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TYW5A2RUC4 315 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 PENKP01210 267 aaPredicted RBP19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 OTUD4Q01804 1114 aaKnown RBP19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 TNK2Q07912 1038 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 PDGFRLQ15198 375 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 YAF2Q8IY57 180 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 PLCD3Q8N3E9 789 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 PRELID2Q8N945 189 aa19.43■□□□□ 0.7
TNFRSF1A-213ENST00000540022 ACTL9Q8TC94 416 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms