RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 ARHGAP20Q9P2F6 1191 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 ADAMTS1Q9UHI8 967 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 PAXBP1Q9Y5B6 917 aa18.87■□□□□ 0.61
SNRPA1-203ENST00000540017 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.615e-8■□□□□ 11.1
SNRPA1-203ENST00000540017 DRGXA6NNA5 263 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 SERPING1P05155 500 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 DLDP09622 509 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 ADRA1BP35368 520 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 ZNF143P52747 638 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 PLEKHG6Q3KR16 790 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 FNDC3BQ53EP0 1204 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 SERPINA13PQ6UXR4 307 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 CCDC117Q8IWD4 279 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 PGBD3Q8N328 593 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 FAM160A2Q8N612 972 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 CCDC185Q8N715 623 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 ALG14Q96F25 216 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 MRGPRX3Q96LB0 322 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 ISCUQ9H1K1 167 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 TMEM51Q9NW97 253 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 MPP6Q9NZW5 540 aa18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 KIAA1522Q9P206 1035 aaPredicted RBP18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 BZW2Q9Y6E2 419 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-203ENST00000540017 OTOGLQ3ZCN5 2332 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 IGLV3-10A0A075B6K4 115 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 A0A087X0T9 212 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 E9PAM4 449 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 ATP5BP06576 529 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 EPHX1P07099 455 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 FAM228BP0C875 321 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 BCKDHBP21953 392 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 HNRNPH3P31942 346 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 USP39Q53GS9 565 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 PPP1R2P3Q6NXS1 205 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 GAS2L3Q86XJ1 694 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 RUBCNQ92622 972 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 MRGPRX1Q96LB2 322 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 TRIM7Q9C029 511 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 MKRN2Q9H000 416 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 RBSNQ9H1K0 784 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 DUSP15Q9H1R2 295 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 MTG2Q9H4K7 406 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 CD93Q9NPY3 652 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 PLA2G4CQ9UP65 541 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 CFAP54Q96N23 3096 aa18.85■□□□□ 0.61
SNRPA1-203ENST00000540017 FAM72CH0Y354 149 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 SRGAP2O75044 1071 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 CLDN11O75508 207 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 P2RY2P41231 377 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 COPAP53621 1224 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 CDH4P55283 916 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 ZNF252P-AS1Q0IIN9 211 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 MAP7D1Q3KQU3 841 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 PLK5Q496M5 336 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 FAM72AQ5TYM5 149 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 LAIR1Q6GTX8 287 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 FAM72DQ6L9T8 149 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 DCUN1D2Q6PH85 259 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 FAM72BQ86X60 149 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 ZNF653Q96CK0 615 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 ZC3H10Q96K80 434 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 CNPY3Q9BT09 278 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 PARVAQ9NVD7 372 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 NCDNQ9UBB6 729 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 CNOT8Q9UFF9 292 aaKnown RBP18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 MBD1Q9UIS9 605 aaPredicted RBP18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 RAB23Q9ULC3 237 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 ERVW-1Q9UQF0 538 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 TBC1D30Q9Y2I9 924 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 OR51B4Q9Y5P0 310 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 CKAP5Q14008 2032 aa18.84■□□□□ 0.61
SNRPA1-203ENST00000540017 RIF1Q5UIP0 2472 aaKnown RBP18.83■□□□□ 0.61
SNRPA1-203ENST00000540017 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 TMEM191CA6NGB0 347 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 PLK1P53350 603 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 ZNF177Q13360 481 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 CAMK2GQ13555 558 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 STARD3Q14849 445 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 MANEALQ5VSG8 457 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 SARM1Q6SZW1 724 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 LRRC31Q6UY01 552 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 TFAP2DQ7Z6R9 452 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 RPL10LQ96L21 214 aaKnown RBP18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 DNAJC7Q99615 494 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 FEM1AQ9BSK4 669 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 ZNF212Q9UDV6 495 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 OR12D3Q9UGF7 316 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 SLCO3A1Q9UIG8 710 aa18.83■□□□□ 0.6
SNRPA1-203ENST00000540017 ANKRD62A6NC57 917 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 SYNCRIPO60506 623 aaKnown RBP18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 MOCS3O95396 460 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 ASLP04424 464 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 TGM1P22735 817 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 EIF4A3P38919 411 aaKnown RBP18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 STK19P49842 368 aaPredicted RBP18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 ECT2LQ008S8 904 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 SLC12A1Q13621 1099 aa18.82■□□□□ 0.6
SNRPA1-203ENST00000540017 TRIM14Q14142 442 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms