RNA–Protein interactions for RNA: ENST00000539977.1

PABPC1P4-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 4, humanhuman

BASIC

Gene PABPC1P4, Length 1,875 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P4-201ENST00000539977 APOL5Q9BWW9 433 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 SLC46A2Q9BY10 475 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 SLC39A8Q9C0K1 460 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 WHRNQ9P202 907 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 AGO1Q9UL18 857 aaKnown RBP10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 ATP8A1Q9Y2Q0 1164 aa10.64□□□□□ -0.71
PABPC1P4-201ENST00000539977 RNF103O00237 685 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 DNALI1O14645 258 aaPredicted RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 SLC11A2P49281 568 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 RPS24P62847 133 aaKnown RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 FAM193AP78312 1265 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 CBX2Q14781 532 aaPredicted RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 PRKD1Q15139 912 aaPredicted RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 TEAD2Q15562 447 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 HP1BP3Q5SSJ5 553 aaPredicted RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 TMC5Q6UXY8 1006 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 PDZD4Q76G19 769 aaPredicted RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 BZW1Q7L1Q6 419 aaKnown RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 HDXQ7Z353 690 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 NLRP14Q86W24 1093 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 RTL3Q8N8U3 475 aaKnown RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 VN1R2Q8NFZ6 395 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 ING5Q8WYH8 240 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 CPT1BQ92523 772 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 CAVIN3Q969G5 261 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZYG11BQ9C0D3 744 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 NOL6Q9H6R4 1146 aaKnown RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 CATSPERBQ9H7T0 1116 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 RAB6BQ9NRW1 208 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 CDH22Q9UJ99 828 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 TPX2Q9ULW0 747 aaKnown RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 CCL26Q9Y258 94 aa10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZNF638Q14966 1978 aaKnown RBP10.63□□□□□ -0.71
PABPC1P4-201ENST00000539977 F5H5T6 163 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 PPP1R12AO14974 1030 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 FGF10O15520 208 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 MOSPD3O75425 235 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 BANF1O75531 89 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 METTL18O95568 372 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 PTPN2P17706 415 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 CDC25CP30307 473 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 SERPINB6P35237 376 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 ACTN2P35609 894 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 GARSP41250 739 aaKnown RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZNF135P52742 658 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 NRG1Q02297 640 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 GALNT2Q10471 571 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 WASHC5Q12768 1159 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 RAB30Q15771 203 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 GPR158Q5T848 1215 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 RNASEH2BQ5TBB1 312 aaKnown RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 HIBCHQ6NVY1 386 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 RHBDF2Q6PJF5 856 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 POTEHQ6S545 545 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 LEKR1Q6ZMV7 388 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 TMC3Q7Z5M5 1100 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 ST13P5Q8NFI4 369 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 CCHCR1Q8TD31 782 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 USP33Q8TEY7 942 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 PLD4Q96BZ4 506 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZNF707Q96C28 371 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 LRRC45Q96CN5 670 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 PRICKLE1Q96MT3 831 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 GCNAQ96QF7 691 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 CFAP97Q9P2B7 532 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZFP37Q9Y6Q3 630 aaPredicted RBP10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 GREB1Q4ZG55 1949 aa10.62□□□□□ -0.71
PABPC1P4-201ENST00000539977 IGLV3-10A0A075B6K4 115 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 CFAP69A5D8W1 941 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 DRGXA6NNA5 263 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 HACD1B0YJ81 288 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 GREM1O60565 184 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 TMEM63AO94886 807 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 RHOQP17081 205 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 PAPOLAP51003 745 aaKnown RBP10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZBTB17Q13105 803 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 UAP1Q16222 522 aaPredicted RBP10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ANKRD20A2Q5SQ80 823 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ADGRF1Q5T601 910 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ANKRD20A1Q5TYW2 823 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ANKRD20A3Q5VUR7 823 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ARHGEF18Q6ZSZ5 1173 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZNF354CQ86Y25 554 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 EIF1ADQ8N9N8 165 aaKnown RBP10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 UHMK1Q8TAS1 419 aaKnown RBP10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 TIFAQ96CG3 184 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 RTP4Q96DX8 246 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 HMCESQ96FZ2 354 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ZSWIM3Q96MP5 696 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 AGAP3Q96P47 875 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 PRKD2Q9BZL6 878 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 PRDM16Q9HAZ2 1276 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 ETNK1Q9HBU6 452 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 MTRF1LQ9UGC7 380 aaKnown RBP10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 MYO9BQ13459 2157 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 TRAV19A0A0A6YYK7 116 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 C5orf60A6NFR6 353 aa10.61□□□□□ -0.71
PABPC1P4-201ENST00000539977 MAP2K7O14733 419 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms