RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 EPB41L5Q9HCM4 733 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CLDND1Q9NY35 253 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 DONSONQ9NYP3 566 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 ZFP37Q9Y6Q3 630 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CFAP69A5D8W1 941 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 ZSCAN5CA6NGD5 496 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 HACD1B0YJ81 288 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 SOX1O00570 391 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 PRAMEF12O95522 483 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 PTK6Q13882 451 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 ADGRE1Q14246 886 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 SLC45A4Q5BKX6 768 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 GET4Q7L5D6 327 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 TP53INP2Q8IXH6 220 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CFAP52Q8N1V2 620 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 LRRN4Q8WUT4 740 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 TFB1MQ8WVM0 346 aaKnown RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 RUBCNQ92622 972 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 PRICKLE1Q96MT3 831 aaPredicted RBP16.61■□□□□ 0.25
TRAF3-204ENST00000539721 ERP44Q9BS26 406 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 PARD6BQ9BYG5 372 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 KLC2Q9H0B6 622 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 NDFIP2Q9NV92 336 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CLEC1BQ9P126 229 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 CDH22Q9UJ99 828 aa16.61■□□□□ 0.25
TRAF3-204ENST00000539721 TRIOBPQ9H2D6 2365 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 NUP205Q92621 2012 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 E2F8A0AVK6 867 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 BCLAF3A2AJT9 711 aaKnown RBP16.6■□□□□ 0.25
TRAF3-204ENST00000539721 NCAM2O15394 837 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 IFNB1P01574 187 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 KRT14P02533 472 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 POU3F3P20264 500 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-204ENST00000539721 MX2P20592 715 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 RBL1P28749 1068 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 TRIP13Q15645 432 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-204ENST00000539721 POTEHQ6S545 545 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 ARID3BQ8IVW6 561 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-204ENST00000539721 BBS7Q8IWZ6 715 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 MICALL1Q8N3F8 863 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 CCDC89Q8N998 374 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 CCNYQ8ND76 341 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 ZSCAN18Q8TBC5 510 aaPredicted RBP16.6■□□□□ 0.25
TRAF3-204ENST00000539721 FAM161BQ96MY7 647 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 TRIM31Q9BZY9 425 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 DPH5Q9H2P9 285 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 ADAM7Q9H2U9 754 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 ASIC3Q9UHC3 531 aa16.6■□□□□ 0.25
TRAF3-204ENST00000539721 ESYT3A0FGR9 886 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 DFFAO00273 331 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 KCNN4O15554 427 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 TBX10O75333 385 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 STIP1P31948 543 aaKnown RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 MAPKAPK2P49137 400 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 SGSHP51688 502 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 GDF10P55107 478 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 CDH4P55283 916 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 RPS24P62847 133 aaKnown RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 GALNT2Q10471 571 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 AP1B1Q10567 949 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 TTC39BQ5VTQ0 682 aaPredicted RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 CES5AQ6NT32 575 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 ARHGAP12Q8IWW6 846 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 NPAS3Q8IXF0 933 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 FAM217AQ8IXS0 508 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 IFT20Q8IY31 132 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 FAM71DQ8N9W8 422 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 GAS2L1Q99501 681 aaPredicted RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 LGMNQ99538 433 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 SHROOM3Q8TF72 1996 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 NYNRINQ9P2P1 1898 aaKnown RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 TYW5A2RUC4 315 aaKnown RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 ETS1P14921 441 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 MCM3P25205 808 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 OR1E1P30953 314 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 VPS41P49754 854 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 VSNL1P62760 191 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 DLX2Q07687 328 aaPredicted RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 USP4Q13107 963 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 PRKD1Q15139 912 aaPredicted RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 ZNF77Q15935 545 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 CTC1Q2NKJ3 1217 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 ATAT1Q5SQI0 421 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 DUPD1Q68J44 220 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 HEATR6Q6AI08 1181 aaKnown RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 WDR93Q6P2C0 686 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 PRUNE1Q86TP1 453 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 UMODL1-AS1Q8N2C9 162 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 CPXM2Q8N436 756 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 GLIS1Q8NBF1 620 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 HJURPQ8NCD3 748 aaPredicted RBP16.59■□□□□ 0.25
TRAF3-204ENST00000539721 CCHCR1Q8TD31 782 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 CASKIN2Q8WXE0 1202 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 FGF13Q92913 245 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 LRCH3Q96II8 777 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 SLC39A8Q9C0K1 460 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 BRD8Q9H0E9 1235 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 RETREG1Q9H6L5 497 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 KIF9Q9HAQ2 790 aa16.59■□□□□ 0.25
TRAF3-204ENST00000539721 PCDH9Q9HC56 1237 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms