RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 IKBKEQ14164 716 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 PKN2Q16513 984 aaKnown RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 PDK4Q16654 411 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 KBTBD12Q3ZCT8 623 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 TEX44Q53QW1 395 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 FAXCQ5TGI0 409 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 MANEALQ5VSG8 457 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 RWDD4Q6NW29 188 aaKnown RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 CCDC121Q6ZUS5 278 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 ZNF534Q76KX8 674 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 MARK2Q7KZI7 788 aaKnown RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 CEP57Q86XR8 500 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 CCDC117Q8IWD4 279 aaPredicted RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 CTAGE3PQ8IX95 158 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 TAB3Q8N5C8 712 aaPredicted RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 RTL3Q8N8U3 475 aaKnown RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 SCAMP5Q8TAC9 235 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 GABPB2Q8TAK5 448 aaPredicted RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 LRRC8CQ8TDW0 803 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 ACMSDQ8TDX5 336 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 NSMCE1Q8WV22 266 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 SLC39A7Q92504 469 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 FBXO32Q969P5 355 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 APOPT1Q96IL0 206 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 SIGLEC10Q96LC7 697 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 TGS1Q96RS0 853 aaKnown RBP10.43□□□□□ -0.74
SPARC-209ENST00000539687 TTPALQ9BTX7 342 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 TMEM106CQ9BVX2 250 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 RHOBTB2Q9BYZ6 727 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 UNC93B1Q9H1C4 597 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 NSMCE4AQ9NXX6 385 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 SEPT10Q9P0V9 454 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 TXNDC16Q9P2K2 825 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 PRDM4Q9UKN5 801 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 MAFFQ9ULX9 164 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 TTLL3Q9Y4R7 772 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 PTPRDP23468 1912 aa10.43□□□□□ -0.74
SPARC-209ENST00000539687 NLRC5Q86WI3 1866 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 TANC1Q9C0D5 1861 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 A0A1W2PQH9 124 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 FAM159BA6NKW6 160 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 TBKBP1A7MCY6 615 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 TYROBPO43914 113 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 TBC1D4O60343 1298 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 PQBP1O60828 265 aaKnown RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 PAGE1O75459 146 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 NEBLO76041 1014 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 GALTP07902 379 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 HAPLN1P10915 354 aaPredicted RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 RHOQP17081 205 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 KRT4P19013 534 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 PSMB4P28070 264 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 SLC11A1P49279 550 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 ALDH7A1P49419 539 aaKnown RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 TBX4P57082 545 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 CORO7P57737 925 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 GAD2Q05329 585 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 SLC18A2Q05940 514 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 TRIP4Q15650 581 aaPredicted RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 USP41Q3LFD5 358 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 MGAT5BQ3V5L5 792 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 CASC4Q6P4E1 433 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 CNKSR3Q6P9H4 555 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 UNC5AQ6ZN44 842 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 TIFABQ6ZNK6 161 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 PIGWQ7Z7B1 504 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 SCD5Q86SK9 330 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 KLHDC8BQ8IXV7 354 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 PPM1NQ8N819 430 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 PDCD7Q8N8D1 485 aaKnown RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 MGARPQ8TDB4 240 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 DENND1AQ8TEH3 1009 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 DEPDC1BQ8WUY9 529 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 PTCD2Q8WV60 388 aaKnown RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 ATP2A3Q93084 1043 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 SLC39A13Q96H72 371 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 BTN2A3PQ96KV6 586 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 FCRL2Q96LA5 508 aaPredicted RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 TEKT5Q96M29 485 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 DEFB118Q96PH6 123 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 WDR83Q9BRX9 315 aaKnown RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 IL22Q9GZX6 179 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 RNF208Q9H0X6 261 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 VPS11Q9H270 941 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 KDM4CQ9H3R0 1056 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 MARCH5Q9NX47 278 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 MOCS1Q9NZB8 636 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 DNAJB4Q9UDY4 337 aa10.42□□□□□ -0.74
SPARC-209ENST00000539687 HBS1LQ9Y450 684 aaKnown RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 USP15Q9Y4E8 981 aaPredicted RBP10.42□□□□□ -0.74
SPARC-209ENST00000539687 PLXNA3P51805 1871 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 MTMR11A4FU01 709 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 ARHGAP42A6NI28 874 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 TCP11X1B4DZS4 312 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 E9PAM4 449 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 FAM72CH0Y354 149 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 MATN3O15232 486 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 CACNG3O60359 315 aa10.41□□□□□ -0.74
SPARC-209ENST00000539687 LPXNO60711 386 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms