RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 IFNB1P01574 187 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 TCF3P15923 654 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ETFBP38117 255 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 MTHFRP42898 656 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 KCNJ1P48048 391 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 NDST2P52849 883 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 CDH4P55283 916 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 GUCY2DQ02846 1103 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 PTK6Q13882 451 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 GRIN2CQ14957 1233 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 OASLQ15646 514 aaKnown RBP15.84■□□□□ 0.13
VAMP1-207ENST00000539047 MAP9Q49MG5 647 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 FAM133BQ5BKY9 247 aaKnown RBP15.84■□□□□ 0.13
VAMP1-207ENST00000539047 C6orf118Q5T5N4 469 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 TIGD7Q6NT04 549 aaPredicted RBP15.84■□□□□ 0.13
VAMP1-207ENST00000539047 C4orf22Q6V702 233 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 Q6ZNB5 142 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 CHST9Q7L1S5 443 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 TFAP2DQ7Z6R9 452 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 C14orf80Q86SX3 495 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ZNF354CQ86Y25 554 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 LRRC49Q8IUZ0 686 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 MICALL1Q8N3F8 863 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 CPXM2Q8N436 756 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ALLCQ8N6M5 410 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 CELF5Q8N6W0 485 aaKnown RBP15.84■□□□□ 0.13
VAMP1-207ENST00000539047 BBOF1Q8ND07 529 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ZSCAN18Q8TBC5 510 aaPredicted RBP15.84■□□□□ 0.13
VAMP1-207ENST00000539047 TMEM121Q9BTD3 319 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ADAM7Q9H2U9 754 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 TTYH1Q9H313 450 aaPredicted RBP15.84■□□□□ 0.13
VAMP1-207ENST00000539047 PCDH9Q9HC56 1237 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 FAM114A2Q9NRY5 505 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 ETNK2Q9NVF9 386 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 HAUS2Q9NVX0 235 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 GDE1Q9NZC3 331 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 MPP6Q9NZW5 540 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 STOML2Q9UJZ1 356 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 MTCH2Q9Y6C9 303 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 MYO9BQ13459 2157 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 DENND4AQ7Z401 1863 aa15.84■□□□□ 0.13
VAMP1-207ENST00000539047 CHD9Q3L8U1 2897 aa15.83■□□□□ 0.13
VAMP1-207ENST00000539047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-207ENST00000539047 GOLGA6L7A0A1B0GV03 622 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 BCLAF3A2AJT9 711 aaKnown RBP15.83■□□□□ 0.12
VAMP1-207ENST00000539047 DRGXA6NNA5 263 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 DFFAO00273 331 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 KCNN4O15554 427 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 NEBLO76041 1014 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 KRT14P02533 472 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 KLKB1P03952 638 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 POU3F3P20264 500 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-207ENST00000539047 WEE1P30291 646 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 OR1E1P30953 314 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 SLC6A4P31645 630 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 SLC7A5Q01650 507 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 ZNF33AQ06730 810 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 GALNT2Q10471 571 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 AP1B1Q10567 949 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 USP4Q13107 963 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 CALCOCO2Q13137 446 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 ZNF177Q13360 481 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-207ENST00000539047 CUL1Q13616 776 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 RFWD3Q6PCD5 774 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 ZNF683Q8IZ20 524 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 KIAA1958Q8N8K9 716 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 TDRD5Q8NAT2 981 aaKnown RBP15.83■□□□□ 0.12
VAMP1-207ENST00000539047 ITFG1Q8TB96 612 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 USP13Q92995 863 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-207ENST00000539047 LRRC45Q96CN5 670 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 HDAC11Q96DB2 347 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 OTUB2Q96DC9 234 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 OLFM3Q96PB7 478 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 CDX2Q99626 313 aaPredicted RBP15.83■□□□□ 0.12
VAMP1-207ENST00000539047 ERP44Q9BS26 406 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 TRIM51Q9BSJ1 452 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 NEU3Q9UQ49 428 aa15.83■□□□□ 0.12
VAMP1-207ENST00000539047 TSPAN3O60637 253 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 RAMP2O60895 175 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 MAP3K6O95382 1288 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 PTGIRP43119 386 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 YBEYP58557 167 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-207ENST00000539047 HLTFQ14527 1009 aaKnown RBP eCLIP15.82■□□□□ 0.12
VAMP1-207ENST00000539047 ANO4Q32M45 955 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 PARP15Q460N3 678 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 C5orf22Q49AR2 442 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 MPPE1Q53F39 396 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 SYCE2Q6PIF2 218 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 NLRP14Q86W24 1093 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 ARID3BQ8IVW6 561 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-207ENST00000539047 NPAS3Q8IXF0 933 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 FAM217AQ8IXS0 508 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 UMODL1-AS1Q8N2C9 162 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 ZNF557Q8N988 423 aaPredicted RBP15.82■□□□□ 0.12
VAMP1-207ENST00000539047 IGSF8Q969P0 613 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 E2F7Q96AV8 911 aa15.82■□□□□ 0.12
VAMP1-207ENST00000539047 PABPC5Q96DU9 382 aaKnown RBP15.82■□□□□ 0.12
VAMP1-207ENST00000539047 TMA16Q96EY4 203 aaKnown RBP15.82■□□□□ 0.12
VAMP1-207ENST00000539047 CELF6Q96J87 481 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms