RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 ADH1CP00326 375 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 PENKP01210 267 aaPredicted RBP24.19■■□□□ 1.46
TMEM260-202ENST00000538838 ADH5P11766 374 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 RHOQP17081 205 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 PTPN7P35236 360 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 DYNLT1P63172 113 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 AMPD2Q01433 879 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 ADCY2Q08462 1091 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 ASB2Q96Q27 587 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 NDFIP2Q9NV92 336 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 ZNF212Q9UDV6 495 aa24.19■■□□□ 1.46
TMEM260-202ENST00000538838 CEP104O60308 925 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 TUBB4AP04350 444 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 BMP1P13497 986 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 TYRP14679 529 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 CETN2P41208 172 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 CDH4P55283 916 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 RUNX3Q13761 415 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 CPA6Q8N4T0 437 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 RTL3Q8N8U3 475 aaKnown RBP24.18■■□□□ 1.46
TMEM260-202ENST00000538838 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.18■■□□□ 1.46
TMEM260-202ENST00000538838 TMEM248Q9NWD8 314 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 SAR1BQ9Y6B6 198 aa24.18■■□□□ 1.46
TMEM260-202ENST00000538838 NYNRINQ9P2P1 1898 aaKnown RBP24.17■■□□□ 1.46
TMEM260-202ENST00000538838 ZNF185O15231 689 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 LUC7L3O95232 432 aaKnown RBP24.17■■□□□ 1.46
TMEM260-202ENST00000538838 TCP1P17987 556 aaKnown RBP24.17■■□□□ 1.46
TMEM260-202ENST00000538838 MPP7Q5T2T1 576 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 NCBP2-AS2Q69YL0 99 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 CHST9Q7L1S5 443 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 CARNMT1Q8N4J0 409 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 WFDC5Q8TCV5 224 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 PBKQ96KB5 322 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 MAK16Q9BXY0 300 aaKnown RBP24.17■■□□□ 1.46
TMEM260-202ENST00000538838 CLEC4EQ9ULY5 219 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 CHD5Q8TDI0 1954 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 WASH4PA8MWX3 477 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 HOXC11O43248 304 aaPredicted RBP24.17■■□□□ 1.46
TMEM260-202ENST00000538838 CLDN11O75508 207 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 GAD2Q05329 585 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 RNF43Q68DV7 783 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 TMCO3Q6UWJ1 677 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 NPWQ8N729 165 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 PLD5Q8N7P1 536 aa24.17■■□□□ 1.46
TMEM260-202ENST00000538838 APOL1O14791 398 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 NARSO43776 548 aaKnown RBP24.16■■□□□ 1.46
TMEM260-202ENST00000538838 CST8O60676 142 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 GAB4Q2WGN9 574 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 SLC9A4Q6AI14 798 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 MFN1Q8IWA4 741 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 NETO2Q8NC67 525 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 MS4A14Q96JA4 679 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 NUP205Q92621 2012 aa24.16■■□□□ 1.46
TMEM260-202ENST00000538838 TCRBV7S2A1N4TA0A589 114 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 C19orf67A6NJJ6 358 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 H0Y626 953 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 MFSD11O43934 449 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 PRLRP16471 622 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 OR1E1P30953 314 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 TDGQ13569 410 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 CDH18Q13634 790 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 ITPRIPL2Q3MIP1 535 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 CXorf57Q6NSI4 855 aaKnown RBP24.15■■□□□ 1.46
TMEM260-202ENST00000538838 C12orf40Q86WS4 652 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 SLC13A5Q86YT5 568 aaPredicted RBP24.15■■□□□ 1.46
TMEM260-202ENST00000538838 NAT16Q8N8M0 369 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 OR52K2Q8NGK3 314 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 KLC2Q9H0B6 622 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 SMARCAL1Q9NZC9 954 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 EFR3BQ9Y2G0 817 aa24.15■■□□□ 1.46
TMEM260-202ENST00000538838 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.14■■□□□ 1.46
TMEM260-202ENST00000538838 CES2O00748 559 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 CACNG3O60359 315 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 FGGP02679 453 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 MAPKAPK2P49137 400 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 NR1H3Q13133 447 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 ZNF177Q13360 481 aaPredicted RBP24.14■■□□□ 1.46
TMEM260-202ENST00000538838 TFDP2Q14188 446 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 FSCBQ5H9T9 825 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 BBS12Q6ZW61 710 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 ADAT2Q7Z6V5 191 aaKnown RBP24.14■■□□□ 1.46
TMEM260-202ENST00000538838 RASGEF1CQ8N431 466 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 CSGALNACT1Q8TDX6 532 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 HAUS1Q96CS2 278 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 CAPZA3Q96KX2 299 aa24.14■■□□□ 1.46
TMEM260-202ENST00000538838 MAP3K6O95382 1288 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 GJA4P35212 333 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 SOX9P48436 509 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 GBE1Q04446 702 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 KLF1Q13351 362 aaPredicted RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 PAFAH1B3Q15102 231 aaKnown RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 NPNTQ6UXI9 565 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 CELF6Q96J87 481 aaKnown RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 NOL6Q9H6R4 1146 aaKnown RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 TJP3O95049 919 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 RHOCP08134 193 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 PECAM1P16284 738 aaPredicted RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 NUMBP49757 651 aa24.13■■□□□ 1.45
TMEM260-202ENST00000538838 ASTLQ6HA08 431 aaPredicted RBP24.13■■□□□ 1.45
TMEM260-202ENST00000538838 C1orf228Q6PIY5 440 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms