RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TSPAN3O60637 253 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 CHKAP35790 457 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 IRAK1P51617 712 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 DPYSL3Q14195 570 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 KRT81Q14533 505 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 DHCR24Q15392 516 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 DPYSL2Q16555 572 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 KCTD19Q17RG1 926 aaPredicted RBP17.74■□□□□ 0.43
CLN6-202ENST00000538696 GLE1Q53GS7 698 aaKnown RBP17.74■□□□□ 0.43
CLN6-202ENST00000538696 FBXL22Q6P050 247 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 TPGS1Q6ZTW0 290 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 ADGRG2Q8IZP9 1017 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 C1orf54Q8WWF1 131 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 ATG4AQ8WYN0 398 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 ATP2A3Q93084 1043 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 IGSF8Q969P0 613 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 HINFPQ9BQA5 517 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 BRD9Q9H8M2 597 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 PCDH18Q9HCL0 1135 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 SPHK2Q9NRA0 654 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 AMACRQ9UHK6 382 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 RAB21Q9UL25 225 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 VANGL2Q9ULK5 521 aa17.74■□□□□ 0.43
CLN6-202ENST00000538696 LRIG2O94898 1065 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 NFATC1O95644 943 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 H2AFXP16104 143 aaPredicted RBP17.73■□□□□ 0.43
CLN6-202ENST00000538696 L1CAMP32004 1257 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 CHRNA3P32297 505 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 COILP38432 576 aaPredicted RBP17.73■□□□□ 0.43
CLN6-202ENST00000538696 VSNL1P62760 191 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 MMRN1Q13201 1228 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 TDGQ13569 410 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 C5orf22Q49AR2 442 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 TFDP3Q5H9I0 405 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 LY6G5CQ5SRR4 150 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 ACBD5Q5T8D3 534 aaPredicted RBP17.73■□□□□ 0.43
CLN6-202ENST00000538696 FBXO38Q6PIJ6 1188 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 RHBDF2Q6PJF5 856 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 TMEM25Q86YD3 366 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 RFX6Q8HWS3 928 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 IRF7Q92985 503 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 FAM118BQ9BPY3 351 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 CALN1Q9BXU9 219 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 ECT2Q9H8V3 914 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 MARK1Q9P0L2 795 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 OR12D3Q9UGF7 316 aa17.73■□□□□ 0.43
CLN6-202ENST00000538696 IGLV3-10A0A075B6K4 115 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 OTOL1A6NHN0 477 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 TTI1O43156 1089 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 HEXIM1O94992 359 aaKnown RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 HOXC13P31276 330 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 PTGIRP43119 386 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 RPS24P62847 133 aaKnown RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 SNX1Q13596 522 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 RUNX3Q13761 415 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 PDK2Q15119 407 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 PPP6R3Q5H9R7 873 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 TJAP1Q5JTD0 557 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 FYB2Q5VWT5 728 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 BBS12Q6ZW61 710 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 CIR1Q86X95 450 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 CFAP52Q8N1V2 620 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 CPA6Q8N4T0 437 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 HJURPQ8NCD3 748 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 FAM71BQ8TC56 605 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 RPRD1AQ96P16 312 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 NECAB3Q96P71 396 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 LRRC19Q9H756 370 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 GTSE1Q9NYZ3 720 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 STIM2Q9P246 746 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 CHD5Q8TDI0 1954 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 ZSCAN5CA6NGD5 496 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 DRGXA6NNA5 263 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 HOXC11O43248 304 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 CREB3O43889 395 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 TBL1XO60907 577 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 CNTN5O94779 1100 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 TJP3O95049 919 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 ADH1CP00326 375 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 PENKP01210 267 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 ADH5P11766 374 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 HOXD9P28356 352 aaPredicted RBP17.72■□□□□ 0.43
CLN6-202ENST00000538696 KCNJ1P48048 391 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 FNTAP49354 379 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 DYNLT1P63172 113 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 GAB4Q2WGN9 574 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 MPPE1Q53F39 396 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 RABGAP1LQ5R372 815 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 RNF43Q68DV7 783 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 WDR93Q6P2C0 686 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 LRRC31Q6UY01 552 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 RNF135Q8IUD6 432 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 TTC8Q8TAM2 541 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 DNASE1L2Q92874 299 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 BHMTQ93088 406 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 HAUS1Q96CS2 278 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 TBC1D31Q96DN5 1066 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 EPAS1Q99814 870 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 TRIM51Q9BSJ1 452 aa17.72■□□□□ 0.43
CLN6-202ENST00000538696 CD320Q9NPF0 282 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms