RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 MMAAQ8IVH4 418 aaKnown RBP8.75□□□□□ -1.01
USP28-203ENST00000537490 WDTC1Q8N5D0 677 aa8.75□□□□□ -1.01
USP28-203ENST00000537490 KDM1BQ8NB78 822 aa8.75□□□□□ -1.01
USP28-203ENST00000537490 PTPRN2Q92932 1015 aa8.75□□□□□ -1.01
USP28-203ENST00000537490 RPL10LQ96L21 214 aaKnown RBP8.75□□□□□ -1.01
USP28-203ENST00000537490 MED15Q96RN5 788 aa8.75□□□□□ -1.01
USP28-203ENST00000537490 CRACR2AQ9BSW2 395 aa8.75□□□□□ -1.01
USP28-203ENST00000537490 THAP9Q9H5L6 903 aa8.75□□□□□ -1.01
USP28-203ENST00000537490 KIAA1522Q9P206 1035 aaPredicted RBP8.75□□□□□ -1.01
USP28-203ENST00000537490 NCKAP1Q9Y2A7 1128 aa8.75□□□□□ -1.01
USP28-203ENST00000537490 MUC22E2RYF6 1773 aaPredicted RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 A0A1W2PPC4 97 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 TARSL2A2RTX5 802 aaKnown RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 GOLGA8CPA6NN73 597 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 C10orf142B7Z368 130 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 WNT9AO14904 365 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 MED7O43513 233 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 RNASEH1O60930 286 aaKnown RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 DKK1O94907 266 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 APOEP02649 317 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 WNT1P04628 370 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 SRPRAP08240 638 aaKnown RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 HOXB3P14651 431 aaPredicted RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 SLC9A1P19634 815 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 MZF1P28698 734 aaPredicted RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 GNA15P30679 374 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 SLC8A1P32418 973 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 CTSKP43235 329 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 STK19P49842 368 aaPredicted RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 YWHAZP63104 245 aaKnown RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 ECT2LQ008S8 904 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 IL9RQ01113 521 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 ARID5BQ14865 1188 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 SUZ12Q15022 739 aaKnown RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 CST6Q15828 149 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 MEA1Q16626 185 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 ARHGAP44Q17R89 818 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 NCEH1Q6PIU2 408 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 TMPRSS7Q7RTY8 843 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 CIR1Q86X95 450 aaPredicted RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 PROSER1Q86XN7 944 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 MARCH9Q86YJ5 346 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 CREBRFQ8IUR6 639 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 CCDC117Q8IWD4 279 aaPredicted RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 DEFB106AQ8N104 65 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 STK40Q8N2I9 435 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 ATP6V0D2Q8N8Y2 350 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 IGSF8Q969P0 613 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 BTN2A3PQ96KV6 586 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 SLC6A18Q96N87 628 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 CDC6Q99741 560 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 PRMT1Q99873 361 aaKnown RBP8.74□□□□□ -1.01
USP28-203ENST00000537490 POPDC2Q9HBU9 364 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.74□□□□□ -1.01
USP28-203ENST00000537490 SCML1Q9UN30 329 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 ITIH6Q6UXX5 1313 aa8.74□□□□□ -1.01
USP28-203ENST00000537490 CABIN1Q9Y6J0 2220 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 CHD6Q8TD26 2715 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 SYNJ2BP-COX16A0A087WUM0 186 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 EDDM13A0A1B0GTR0 161 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 KCNU1A8MYU2 1149 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 F5H5T6 163 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 VILLO15195 856 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 PCDHGA12O60330 932 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 GRAP2O75791 330 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 RNASEH2AO75792 299 aaKnown RBP8.73□□□□□ -1.01
USP28-203ENST00000537490 MOCS3O95396 460 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 FGFR1OPO95684 399 aaKnown RBP8.73□□□□□ -1.01
USP28-203ENST00000537490 VAV1P15498 845 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 PDGFRAP16234 1089 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 USP8P40818 1118 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 PSMD8P48556 350 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 CCT8P50990 548 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 RACK1P63244 317 aaKnown RBP8.73□□□□□ -1.01
USP28-203ENST00000537490 PDCLQ13371 301 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 KCNJ12Q14500 433 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 TRIM65Q6PJ69 517 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 LRSAM1Q6UWE0 723 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 ENOSF1Q7L5Y1 443 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 ADAT2Q7Z6V5 191 aaKnown RBP8.73□□□□□ -1.01
USP28-203ENST00000537490 IRF2BP1Q8IU81 584 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 PASD1Q8IV76 773 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 CCAR2Q8N163 923 aaKnown RBP8.73□□□□□ -1.01
USP28-203ENST00000537490 AADATQ8N5Z0 425 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 OR52K2Q8NGK3 314 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 OR2T34Q8NGX1 318 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 MDM1Q8TC05 714 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 ALG14Q96F25 216 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 SLC2A13Q96QE2 648 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 CPXM1Q96SM3 734 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 OMDQ99983 421 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 TRIM62Q9BVG3 475 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 COX16Q9P0S2 106 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 ADAMTS1Q9UHI8 967 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 SLC12A6Q9UHW9 1150 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 AJAP1Q9UKB5 411 aaPredicted RBP8.73□□□□□ -1.01
USP28-203ENST00000537490 LHX6Q9UPM6 363 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 CEP83Q9Y592 693 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 LAMA1P25391 3075 aa8.73□□□□□ -1.01
USP28-203ENST00000537490 CACNA1GO43497 2377 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms