RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 OSBPL8Q9BZF1 889 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 TRPV5Q9NQA5 729 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 TMEM248Q9NWD8 314 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 EFR3BQ9Y2G0 817 aa24.96■■□□□ 1.59
HMGA2-208ENST00000537429 NEDD8-MDP1E9PL57 170 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 DCLK1O15075 740 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 CLDN11O75508 207 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 ADH5P11766 374 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 KRT10P13645 584 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 TYRP14679 529 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 NR1H3Q13133 447 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 LLGL1Q15334 1064 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 PQLC3Q8N755 202 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 RTL3Q8N8U3 475 aaKnown RBP24.95■■□□□ 1.58
HMGA2-208ENST00000537429 PBKQ96KB5 322 aa24.95■■□□□ 1.58
HMGA2-208ENST00000537429 TCP1P17987 556 aaKnown RBP24.94■■□□□ 1.58
HMGA2-208ENST00000537429 GAB4Q2WGN9 574 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 ITPRIPL2Q3MIP1 535 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 SEL1L2Q5TEA6 688 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 TFAP2DQ7Z6R9 452 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.94■■□□□ 1.58
HMGA2-208ENST00000537429 TTC8Q8TAM2 541 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 MAK16Q9BXY0 300 aaKnown RBP24.94■■□□□ 1.58
HMGA2-208ENST00000537429 PRDM16Q9HAZ2 1276 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 NDFIP2Q9NV92 336 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 ETNK2Q9NVF9 386 aa24.94■■□□□ 1.58
HMGA2-208ENST00000537429 CES2O00748 559 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 LUC7L3O95232 432 aaKnown RBP24.93■■□□□ 1.58
HMGA2-208ENST00000537429 ADCY2Q08462 1091 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 KAZNQ674X7 775 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 SLC9A4Q6AI14 798 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 RFX6Q8HWS3 928 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 CSGALNACT1Q8TDX6 532 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 HERPUD2Q9BSE4 406 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 HEMGNQ9BXL5 484 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 DONSONQ9NYP3 566 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 CLEC4EQ9ULY5 219 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 TBC1D30Q9Y2I9 924 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 SAR1BQ9Y6B6 198 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 COL4A3Q01955 1670 aa24.93■■□□□ 1.58
HMGA2-208ENST00000537429 CACNG3O60359 315 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 OR1E1P30953 314 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 MAPKAPK2P49137 400 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 AMPD2Q01433 879 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 NCBP2-AS2Q69YL0 99 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 COG1Q8WTW3 980 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 DNASE1L2Q92874 299 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 FBXO10Q9UK96 956 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 MFHAS1Q9Y4C4 1052 aa24.92■■□□□ 1.58
HMGA2-208ENST00000537429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 NARSO43776 548 aaKnown RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 SRFP11831 508 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 GJA4P35212 333 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 ZNF177Q13360 481 aaPredicted RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 TFDP2Q14188 446 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 CXorf57Q6NSI4 855 aaKnown RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 TMCO3Q6UWJ1 677 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 MFN1Q8IWA4 741 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 ETFBKMTQ8IXQ9 262 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 RASGEF1CQ8N431 466 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 CARNMT1Q8N4J0 409 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 PLD5Q8N7P1 536 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 FIBINQ8TAL6 211 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 WFDC5Q8TCV5 224 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 KLC2Q9H0B6 622 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 SLC2A4RGQ9NR83 387 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 TICRRQ7Z2Z1 1910 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 COL4A2P08572 1712 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 H0Y626 953 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 CEP104O60308 925 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 CST8O60676 142 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 PAFAH1B3Q15102 231 aaKnown RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 FSCBQ5H9T9 825 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 TJAP1Q5JTD0 557 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 BBS12Q6ZW61 710 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 SETD3Q86TU7 594 aaPredicted RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 GJD3Q8N144 294 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 NAT16Q8N8M0 369 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 OR52K2Q8NGK3 314 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 CHFRQ96EP1 664 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 XPO6Q96QU8 1125 aaKnown RBP24.91■■□□□ 1.58
HMGA2-208ENST00000537429 SLC2A11Q9BYW1 496 aa24.91■■□□□ 1.58
HMGA2-208ENST00000537429 APOL1O14791 398 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 TJP3O95049 919 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 ZFXP17010 805 aaPredicted RBP24.9■■□□□ 1.58
HMGA2-208ENST00000537429 PFKPQ01813 784 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 KLF1Q13351 362 aaPredicted RBP24.9■■□□□ 1.58
HMGA2-208ENST00000537429 CDH18Q13634 790 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 C12orf40Q86WS4 652 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 SLC13A5Q86YT5 568 aaPredicted RBP24.9■■□□□ 1.58
HMGA2-208ENST00000537429 RNF135Q8IUD6 432 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 UMODL1-AS1Q8N2C9 162 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 LZTR1Q8N653 840 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 NPWQ8N729 165 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 ZNF557Q8N988 423 aaPredicted RBP24.9■■□□□ 1.58
HMGA2-208ENST00000537429 DUSP12Q9UNI6 340 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 SORCS3Q9UPU3 1222 aa24.9■■□□□ 1.58
HMGA2-208ENST00000537429 ZNF185O15231 689 aa24.89■■□□□ 1.57
HMGA2-208ENST00000537429 DYNLT1P63172 113 aa24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms