RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SEZ6LQ9BYH1 1024 aa5.7□□□□□ -1.5
CCDC7-208ENST00000537047 EPS8L2Q9H6S3 715 aa5.7□□□□□ -1.5
CCDC7-208ENST00000537047 DDX21Q9NR30 783 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC7-208ENST00000537047 UBE2J1Q9Y385 318 aaPredicted RBP5.7□□□□□ -1.5
CCDC7-208ENST00000537047 OR6C75A6NL08 312 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 CAMTA2O94983 1202 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 SLC5A1P13866 664 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 COMPP49747 757 aaPredicted RBP5.69□□□□□ -1.5
CCDC7-208ENST00000537047 GPR18Q14330 331 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 IZUMO4Q1ZYL8 232 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 MDGA2Q7Z553 956 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 NR4A3Q92570 626 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 ADAD1Q96M93 576 aaKnown RBP5.69□□□□□ -1.5
CCDC7-208ENST00000537047 ZNF304Q9HCX3 659 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 TXNRD2Q9NNW7 524 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 KCNK9Q9NPC2 374 aa5.69□□□□□ -1.5
CCDC7-208ENST00000537047 KRCC1Q9NPI7 259 aaPredicted RBP5.69□□□□□ -1.5
CCDC7-208ENST00000537047 PNMA6EA0A0J9YXQ4 647 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 PPP1R3DO95685 299 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 KLKB1P03952 638 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 HARSP12081 509 aaKnown RBP5.68□□□□□ -1.5
CCDC7-208ENST00000537047 ATF3P18847 181 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 PMS2P54278 862 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 GAS1P54826 345 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 NSUN2Q08J23 767 aaKnown RBP eCLIP5.68□□□□□ -1.5
CCDC7-208ENST00000537047 PMS2P11Q13670 270 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 GRM4Q14833 912 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 MAPKAPK3Q16644 382 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 ARL13AQ5H913 290 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-208ENST00000537047 GFI1BQ5VTD9 330 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 ANKRD40Q6AI12 368 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 HIBCHQ6NVY1 386 aaPredicted RBP5.68□□□□□ -1.5
CCDC7-208ENST00000537047 WDR93Q6P2C0 686 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 RASGRP3Q8IV61 690 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 FAM50BQ9Y247 325 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 PCDHGB1Q9Y5G3 927 aa5.68□□□□□ -1.5
CCDC7-208ENST00000537047 MSI1O43347 362 aaKnown RBP5.67□□□□□ -1.5
CCDC7-208ENST00000537047 SPRY3O43610 288 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 ZNF432O94892 652 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 CER1O95813 267 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 IDEP14735 1019 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 GALNT3Q14435 633 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 AAK1Q2M2I8 961 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.67□□□□□ -1.5
CCDC7-208ENST00000537047 FAM83HQ6ZRV2 1179 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-208ENST00000537047 WDR75Q8IWA0 830 aaKnown RBP5.67□□□□□ -1.5
CCDC7-208ENST00000537047 CADM3Q8N126 398 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 TXLNBQ8N3L3 684 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 TBCBQ99426 244 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 WDR77Q9BQA1 342 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-208ENST00000537047 PAAF1Q9BRP4 392 aa5.67□□□□□ -1.5
CCDC7-208ENST00000537047 C6orf106Q9H6K1 298 aaPredicted RBP5.67□□□□□ -1.5
CCDC7-208ENST00000537047 LOC105369274A0A096LPK9 316 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 LOC102723532A0A0G2JNH3 316 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 PCDH17O14917 1159 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 NCK2O43639 380 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 DDNO94850 711 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-208ENST00000537047 ARSBP15848 533 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 RASSF2P50749 326 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 CLCN5P51795 746 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 FOXL2P58012 376 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 TAS2R50P59544 299 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 SELENOVP59797 346 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 CSHL1Q14406 222 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 ARL13BQ3SXY8 428 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 FNBP1LQ5T0N5 605 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 C10orf76Q5T2E6 689 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 OR4N4Q8N0Y3 316 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 GABPB2Q8TAK5 448 aaPredicted RBP5.66□□□□□ -1.5
CCDC7-208ENST00000537047 COLEC11Q9BWP8 271 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 TM6SF1Q9BZW5 370 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 SFXN1Q9H9B4 322 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 RAB21Q9UL25 225 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 DTNAQ9Y4J8 743 aa5.66□□□□□ -1.5
CCDC7-208ENST00000537047 NKX2-8O15522 239 aa5.65□□□□□ -1.5
CCDC7-208ENST00000537047 SHBQ15464 509 aa5.65□□□□□ -1.5
CCDC7-208ENST00000537047 DCAF12L2Q5VW00 463 aa5.65□□□□□ -1.5
CCDC7-208ENST00000537047 ARMC9Q7Z3E5 817 aa5.65□□□□□ -1.5
CCDC7-208ENST00000537047 FAR2Q96K12 515 aa5.65□□□□□ -1.5
CCDC7-208ENST00000537047 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.65□□□□□ -1.5
CCDC7-208ENST00000537047 TNFSF13BQ9Y275 285 aa5.65□□□□□ -1.5
CCDC7-208ENST00000537047 CKAP5Q14008 2032 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 GAGE12JA6NER3 117 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 PLGP00747 810 aaPredicted RBP5.64□□□□□ -1.51
CCDC7-208ENST00000537047 IGFBP2P18065 325 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 HOXD3P31249 432 aaPredicted RBP5.64□□□□□ -1.51
CCDC7-208ENST00000537047 KCNJ4P48050 445 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 ART1P52961 327 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 TMPRSS3P57727 454 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 FAM3BP58499 235 aaPredicted RBP5.64□□□□□ -1.51
CCDC7-208ENST00000537047 RPL15P61313 204 aaKnown RBP5.64□□□□□ -1.51
CCDC7-208ENST00000537047 SLC35G1Q2M3R5 365 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 ALG10Q5BKT4 473 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 FAM76BQ5HYJ3 339 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 ALG10BQ5I7T1 473 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 Q6ZSV7 163 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 FAM217AQ8IXS0 508 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 KDM1BQ8NB78 822 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 ZNF556Q9HAH1 456 aa5.64□□□□□ -1.51
CCDC7-208ENST00000537047 PNRC2Q9NPJ4 139 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms