RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 LIMCH1Q9UPQ0 1083 aa7.22□□□□□ -1.25
CCDC60-203ENST00000536742 HDAC5Q9UQL6 1122 aa7.22□□□□□ -1.25
CCDC60-203ENST00000536742 GREB1LQ9C091 1923 aaPredicted RBP7.22□□□□□ -1.25
CCDC60-203ENST00000536742 PTPRBP23467 1997 aa7.22□□□□□ -1.25
CCDC60-203ENST00000536742 LRRK2Q5S007 2527 aa7.22□□□□□ -1.25
CCDC60-203ENST00000536742 ITPR2Q14571 2701 aa7.21□□□□□ -1.25
CCDC60-203ENST00000536742 F5P12259 2224 aa7.21□□□□□ -1.25
CCDC60-203ENST00000536742 PCNX1Q96RV3 2341 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 APAF1O14727 1248 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MFAP3LO75121 409 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 RFPL2O75678 378 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 TTLL1O95922 423 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 GLUD1P00367 558 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 COMTP21964 271 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 SNAP25P60880 206 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 FAM189BP81408 668 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 RAB39AQ14964 217 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 ZNF280BQ86YH2 543 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 GALNT15Q8N3T1 639 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 FGF13Q92913 245 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MSANTD3Q96H12 275 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 ZNF512Q96ME7 567 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MRPL9Q9BYD2 267 aaKnown RBP7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MLXIPQ9HAP2 919 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 TRPV5Q9NQA5 729 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MRPL17Q9NRX2 175 aaKnown RBP7.21□□□□□ -1.26
CCDC60-203ENST00000536742 TDP1Q9NUW8 608 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 CALCOCO1Q9P1Z2 691 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 SSX2IPQ9Y2D8 614 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MYRFQ9Y2G1 1151 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 TRPV2Q9Y5S1 764 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 USP9YO00507 2555 aaPredicted RBP7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MGAQ8IWI9 3026 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 CCDC171Q6TFL3 1326 aa7.21□□□□□ -1.26
CCDC60-203ENST00000536742 MUC22E2RYF6 1773 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-203ENST00000536742 NT5C1B-RDH14C9J2C7 533 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 GGPS1O95749 300 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 TGFB3P10600 412 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 RPL17P18621 184 aaKnown RBP7.2□□□□□ -1.26
CCDC60-203ENST00000536742 GNAT2P19087 354 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 SLC6A9P48067 706 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 ATXN3P54252 364 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-203ENST00000536742 CXADRP78310 365 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 MAPK6Q16659 721 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 MINDY4Q4G0A6 757 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 DCAF17Q5H9S7 520 aaPredicted RBP7.2□□□□□ -1.26
CCDC60-203ENST00000536742 PRAMEF14Q5SWL7 426 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 LIMS2Q7Z4I7 341 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 RHOT1Q8IXI2 618 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 RAVER1Q8IY67 606 aaKnown RBP7.2□□□□□ -1.26
CCDC60-203ENST00000536742 MYO1HQ8N1T3 1032 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 CAMKK1Q8N5S9 505 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 PNPLA1Q8N8W4 532 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 OR2I1PQ8NGU4 316 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 HPS3Q969F9 1004 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 MIEF2Q96C03 454 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 IGSF21Q96ID5 467 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 MAP3K14Q99558 947 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 RANBP17Q9H2T7 1088 aaKnown RBP7.2□□□□□ -1.26
CCDC60-203ENST00000536742 BRD9Q9H8M2 597 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 TUBE1Q9UJT0 475 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 POLHQ9Y253 713 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 MAN2B2Q9Y2E5 1009 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 SIK3Q9Y2K2 1263 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 PIAS3Q9Y6X2 628 aa7.2□□□□□ -1.26
CCDC60-203ENST00000536742 WDR81Q562E7 1941 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 MBLAC1A4D2B0 266 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-203ENST00000536742 FOXS1O43638 330 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 MGEA5O60502 916 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 ZNF623O75123 536 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 GPR32O75388 356 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 ALOX15P16050 662 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-203ENST00000536742 ENGP17813 658 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 PTPN7P35236 360 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 MSX2P35548 267 aaPredicted RBP7.19□□□□□ -1.26
CCDC60-203ENST00000536742 FOXL1Q12952 345 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 IFIT1BQ5T764 474 aaKnown RBP7.19□□□□□ -1.26
CCDC60-203ENST00000536742 DRC7Q8IY82 874 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 D2HGDHQ8N465 521 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 RSPH1Q8WYR4 309 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 C1GALT1C1Q96EU7 318 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 MVB12AQ96EY5 273 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 ZNF768Q9H5H4 540 aaKnown RBP7.19□□□□□ -1.26
CCDC60-203ENST00000536742 KMT5AQ9NQR1 393 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 GEMIN8Q9NWZ8 242 aaKnown RBP7.19□□□□□ -1.26
CCDC60-203ENST00000536742 MTMR4Q9NYA4 1195 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 FAM30AQ9NZY2 134 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 TCAF1Q9Y4C2 921 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 NF1P21359 2839 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 ATG2BQ96BY7 2078 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 KDM3AQ9Y4C1 1321 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 NBPF19A0A087WUL8 3843 aa7.19□□□□□ -1.26
CCDC60-203ENST00000536742 IGKV6D-41A0A0C4DH26 115 aa7.18□□□□□ -1.26
CCDC60-203ENST00000536742 MYF5P13349 255 aa7.18□□□□□ -1.26
CCDC60-203ENST00000536742 LPOP22079 712 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-203ENST00000536742 MCCP23508 829 aa7.18□□□□□ -1.26
CCDC60-203ENST00000536742 CCNE1P24864 410 aa7.18□□□□□ -1.26
CCDC60-203ENST00000536742 PXNP49023 591 aaPredicted RBP7.18□□□□□ -1.26
CCDC60-203ENST00000536742 SELENOPP49908 381 aa7.18□□□□□ -1.26
CCDC60-203ENST00000536742 SLC14A1Q13336 389 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms