RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 BNC1Q01954 994 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 RAPGEF1Q13905 1077 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 TAF5Q15542 800 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 FKBP15Q5T1M5 1219 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 NADSYN1Q6IA69 706 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 SLCO6A1Q86UG4 719 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 FAM124AQ86V42 546 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 EPS8L1Q8TE68 723 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 WFIKKN2Q8TEU8 576 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 SETD7Q8WTS6 366 aaKnown RBP12.89□□□□□ -0.35
PRKDC-207ENST00000536483 FAM149B1Q96BN6 582 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 PGAP3Q96FM1 320 aaPredicted RBP12.89□□□□□ -0.35
PRKDC-207ENST00000536483 BTN2A3PQ96KV6 586 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 FUCA2Q9BTY2 467 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 NUP58Q9BVL2 599 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 GAREM1Q9H706 876 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 EIF2B4Q9UI10 523 aaKnown RBP12.89□□□□□ -0.35
PRKDC-207ENST00000536483 NOCTQ9UK39 431 aaKnown RBP12.89□□□□□ -0.35
PRKDC-207ENST00000536483 PCOLCE2Q9UKZ9 415 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 CEP83Q9Y592 693 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 KNL1Q8NG31 2342 aa12.89□□□□□ -0.35
PRKDC-207ENST00000536483 ANKRD11Q6UB99 2663 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-207ENST00000536483 CAPN9O14815 690 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 TSPAN3O60637 253 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 IGLV3-19P01714 112 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 ERBB2P04626 1255 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 CYP1A1P04798 512 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-207ENST00000536483 SLC2A3P11169 496 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 HLA-EP13747 358 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 HLA-FP30511 346 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 SLC6A4P31645 630 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 NOS2P35228 1153 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 MATKP42679 507 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 CDK17Q00537 523 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 ARID5AQ03989 594 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 GSE1Q14687 1217 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 KLHL40Q2TBA0 621 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 MS4A13Q5J8X5 152 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 SERPINA13PQ6UXR4 307 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 CCNI2Q6ZMN8 369 aaPredicted RBP12.88□□□□□ -0.35
PRKDC-207ENST00000536483 BNIPLQ7Z465 357 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 NOP9Q86U38 636 aaKnown RBP12.88□□□□□ -0.35
PRKDC-207ENST00000536483 DEFB106AQ8N104 65 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 FIBINQ8TAL6 211 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 PRMT1Q99873 361 aaKnown RBP12.88□□□□□ -0.35
PRKDC-207ENST00000536483 TM7SF3Q9NS93 570 aa12.88□□□□□ -0.35
PRKDC-207ENST00000536483 APOBEC2Q9Y235 224 aaKnown RBP12.88□□□□□ -0.35
PRKDC-207ENST00000536483 FNDC3AQ9Y2H6 1198 aaKnown RBP12.88□□□□□ -0.35
PRKDC-207ENST00000536483 PES1O00541 588 aaKnown RBP12.87□□□□□ -0.35
PRKDC-207ENST00000536483 EPHB6O15197 1021 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 DAB1O75553 588 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 CER1O95813 267 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 SOX5P35711 763 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 POLR2FP61218 127 aaKnown RBP12.87□□□□□ -0.35
PRKDC-207ENST00000536483 CDR2Q01850 454 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 SYCP1Q15431 976 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 HLA-BQ31612 363 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 DCAF6Q58WW2 860 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 FAM183BPQ6ZVS7 135 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 GLRX5Q86SX6 157 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 ADIPOR2Q86V24 386 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 PASD1Q8IV76 773 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 DHX40Q8IX18 779 aaKnown RBP12.87□□□□□ -0.35
PRKDC-207ENST00000536483 ZNF366Q8N895 744 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 KDM1BQ8NB78 822 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 HJURPQ8NCD3 748 aaPredicted RBP12.87□□□□□ -0.35
PRKDC-207ENST00000536483 OR2T3Q8NH03 318 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 CYB5D2Q8WUJ1 264 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 SNX19Q92543 992 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 TTC17Q96AE7 1141 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 C18orf8Q96DM3 657 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 NPY6RQ99463 290 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 SLCO1B1Q9Y6L6 691 aa12.87□□□□□ -0.35
PRKDC-207ENST00000536483 FASNP49327 2511 aaKnown RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 A0A1B0GVT2 93 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 SMTNL1A8MU46 457 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 APOEP02649 317 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 ZNF883P0CG24 379 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 ATP1A3P13637 1013 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 CHRNB2P17787 502 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 CCR1P32246 355 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 ACSL1P33121 698 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 STAT1P42224 750 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 CSNK1EP49674 416 aaKnown RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 KLK7P49862 253 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 SGSHP51688 502 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 NOMO3P69849 1222 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 PITX1P78337 314 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 CAMK2GQ13555 558 aaPredicted RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 ARID5BQ14865 1188 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 C5orf22Q49AR2 442 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
PRKDC-207ENST00000536483 FNDC3BQ53EP0 1204 aaKnown RBP12.86□□□□□ -0.35
PRKDC-207ENST00000536483 ZC3H12AQ5D1E8 599 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms