RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 NETO2Q8NC67 525 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 PANX3Q96QZ0 392 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 SORT1Q99523 831 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 GOLGA2P5Q9HBQ8 144 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 PIGVQ9NUD9 493 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 DNAJC28Q9NX36 388 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 BFARQ9NZS9 450 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 COX16Q9P0S2 106 aa16.43■□□□□ 0.22
CHMP1A-202ENST00000535997 MAGEB16A2A368 324 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 ERI2A8K979 691 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 SIN3BO75182 1162 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 AP2A1O95782 977 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 F2P00734 622 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 CPA3P15088 417 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 MAGEA12P43365 314 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 ABCE1P61221 599 aaKnown RBP16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 AP2B1P63010 937 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 GRB14Q14449 540 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 SNX17Q15036 470 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 CLEC20AQ6ZU45 233 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 GPR142Q7Z601 462 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 OR6Y1Q8NGX8 325 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 NTAN1Q96AB6 310 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 FCRL3Q96P31 734 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 BRD8Q9H0E9 1235 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 GPAMQ9HCL2 828 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 KLHL8Q9P2G9 620 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 KCNK1O00180 336 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 CLDN5O00501 218 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 DYNC1LI2O43237 492 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 SKAP2O75563 359 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 C6orf222P0C671 652 aaPredicted RBP16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 ERCC2P18074 760 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 IDH3AP50213 366 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 SCAPQ12770 1279 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 UBXN11Q5T124 520 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 C1orf146Q5VVC0 180 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 DPY19L2Q6NUT2 758 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 CES3Q6UWW8 571 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 OR52K1Q8NGK4 314 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 TMEM40Q8WWA1 233 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 DNAJB3Q8WWF6 145 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 CLPTM1LQ96KA5 538 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 RBBP8Q99708 897 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 SNX15Q9NRS6 342 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 VANGL2Q9ULK5 521 aa16.42■□□□□ 0.22
CHMP1A-202ENST00000535997 A0A088AWK7 358 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 GABRDO14764 452 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 MTSS1O43312 755 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 NEBLO76041 1014 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 USP1O94782 785 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 FBXO21O94952 628 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 ANPEPP15144 967 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 PTPN3P26045 913 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 LRPAP1P30533 357 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 TKTL1P51854 596 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 ADAM17P78536 824 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 HIC1Q14526 733 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 ZNF184Q99676 751 aaPredicted RBP16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 KRT82Q9NSB4 513 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 PNPOQ9NVS9 261 aa16.41■□□□□ 0.22
CHMP1A-202ENST00000535997 DPPA5A6NC42 116 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 ZNF195O14628 629 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 ADCY6O43306 1168 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FKBP6O75344 327 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FYNP06241 537 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 SERPINB8P50452 374 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 PPIDQ08752 370 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 SEMA3BQ13214 749 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 INTS6LQ5JSJ4 861 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 TMCO4Q5TGY1 634 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FSTL4Q6MZW2 842 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 TP53INP2Q8IXH6 220 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 DCLK2Q8N568 766 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 CMTM5Q96DZ9 223 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 LBHD1Q9BQE6 289 aaPredicted RBP16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 VCXQ9H320 206 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 CASS4Q9NQ75 786 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 IPPQ9Y573 584 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 BTBD19C9JJ37 291 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FAM72CH0Y354 149 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 MPOP05164 745 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 COPAP53621 1224 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 LIMK2P53671 638 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FAM72AQ5TYM5 149 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FAM72DQ6L9T8 149 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 AAGABQ6PD74 315 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 ATG14Q6ZNE5 492 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 HFE2Q6ZVN8 426 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 MAVSQ7Z434 540 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 STRA8Q7Z7C7 330 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FAM72BQ86X60 149 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 SLC7A14Q8TBB6 771 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 MS4A4AQ96JQ5 239 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 AGAP3Q96P47 875 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 WDR6Q9NNW5 1121 aaKnown RBP16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 IL1RAPL1Q9NZN1 696 aa16.4■□□□□ 0.22
CHMP1A-202ENST00000535997 FBXW11Q9UKB1 542 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms