RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 BUB1BO60566 1050 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 RNF40O75150 1001 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 CLDN11O75508 207 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 RARAP10276 462 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 PABPC1P11940 636 aaKnown RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 SSR1P43307 286 aaKnown RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 KIR2DL1P43626 348 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 CDH4P55283 916 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 TAS2R40P59535 323 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 LMAN2Q12907 356 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 ZNF177Q13360 481 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 GAS6Q14393 721 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 SMTNL2Q2TAL5 461 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 FBXO43Q4G163 708 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 BOLA3Q53S33 107 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 KCNT1Q5JUK3 1230 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 EMC10Q5UCC4 262 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 TMEM215Q68D42 235 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 CXorf57Q6NSI4 855 aaKnown RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 RWDD4Q6NW29 188 aaKnown RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 PKN3Q6P5Z2 889 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 TFAP2DQ7Z6R9 452 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 ADIPOR2Q86V24 386 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 CCDC117Q8IWD4 279 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 ZNF557Q8N988 423 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 OR52K2Q8NGK3 314 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 TBC1D31Q96DN5 1066 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 KCTD15Q96SI1 283 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 EPAS1Q99814 870 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 ZYG11BQ9C0D3 744 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 CHRDQ9H2X0 955 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 RRAGDQ9NQL2 400 aaPredicted RBP12.42□□□□□ -0.42
CHD4-203ENST00000535717 ZNF212Q9UDV6 495 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 TBC1D30Q9Y2I9 924 aa12.42□□□□□ -0.42
CHD4-203ENST00000535717 DOCK4Q8N1I0 1966 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 ATG2BQ96BY7 2078 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 BUB1O43683 1085 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 CREB3O43889 395 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 RHOQP17081 205 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 HOXC13P31276 330 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 MAGEA9P43362 315 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 KIF5AQ12840 1032 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 MTAPQ13126 283 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 HADHQ16836 314 aaKnown RBP12.41□□□□□ -0.42
CHD4-203ENST00000535717 FUT11Q495W5 492 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 ATP13A4Q4VNC1 1196 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 C2orf27AQ580R0 203 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 NUDT18Q6ZVK8 323 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 NLRP14Q86W24 1093 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 RPLP0P6Q8NHW5 317 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 TPCN2Q8NHX9 752 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 WFIKKN2Q8TEU8 576 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 TEKT4Q8WW24 435 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 SORCS1Q8WY21 1168 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 HSPH1Q92598 858 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 GOLPH3Q9H4A6 298 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 ZDHHC4Q9NPG8 344 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.41□□□□□ -0.42
CHD4-203ENST00000535717 ELOVL2Q9NXB9 296 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 KIAA1522Q9P206 1035 aaPredicted RBP12.41□□□□□ -0.42
CHD4-203ENST00000535717 TRIM10Q9UDY6 481 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 INTS6Q9UL03 887 aaKnown RBP12.41□□□□□ -0.42
CHD4-203ENST00000535717 STARD13Q9Y3M8 1113 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 HYOU1Q9Y4L1 999 aa12.41□□□□□ -0.42
CHD4-203ENST00000535717 WDFY4Q6ZS81 3184 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 KMT2EQ8IZD2 1858 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 ZNF318Q5VUA4 2279 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 EEF2KO00418 725 aaKnown RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 TIMM44O43615 452 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 NRDCO43847 1150 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 PTMAP06454 111 aaKnown RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 GOT1P17174 413 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 COMTP21964 271 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 MZF1P28698 734 aaPredicted RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 EPHB2P29323 1055 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 OR1E1P30953 314 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 TIE1P35590 1138 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 GJC1P36383 396 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 CSKP41240 450 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 SLC1A1P43005 524 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 TPI1P60174 286 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 MRPS21P82921 87 aaKnown RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 DPYSL2Q16555 572 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 PPP6R3Q5H9R7 873 aaPredicted RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 PITRM1Q5JRX3 1037 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 RNF219Q5W0B1 726 aaPredicted RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 EGFLAMQ63HQ2 1017 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 MBLAC2Q68D91 279 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 SETD3Q86TU7 594 aaPredicted RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 APCDD1Q8J025 514 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 AHI1Q8N157 1196 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 TXLNBQ8N3L3 684 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 ALLCQ8N6M5 410 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 IL17RCQ8NAC3 791 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 DTWD2Q8NBA8 298 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 ALG14Q96F25 216 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 ZNF830Q96NB3 372 aaPredicted RBP12.4□□□□□ -0.42
CHD4-203ENST00000535717 FEM1AQ9BSK4 669 aa12.4□□□□□ -0.42
CHD4-203ENST00000535717 CIPCQ9C0C6 399 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms