RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 MAGEB5Q9BZ81 275 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 CD248Q9HCU0 757 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 STON1Q9Y6Q2 735 aa23.42■■□□□ 1.34
SFSWAP-204ENST00000535399 MYO18AQ92614 2054 aaKnown RBP23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 A0A1W2PQF6 199 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 WASH3PC4AMC7 463 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 AKR1B10O60218 316 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 HOXB2P14652 356 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 CSKP41240 450 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 IL12RB1P42701 662 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 CDH4P55283 916 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 PITRM1Q5JRX3 1037 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 SCYL2Q6P3W7 929 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 ZC3H14Q6PJT7 736 aaKnown RBP23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 LONP2Q86WA8 852 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 OR52K2Q8NGK3 314 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 CYB5D2Q8WUJ1 264 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 CCDC42Q96M95 316 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 OR12D3Q9UGF7 316 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 EBF1Q9UH73 591 aa23.41■■□□□ 1.34
SFSWAP-204ENST00000535399 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 CCDC163A0A0D9SF12 145 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 PROB1E7EW31 1015 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 FAM72CH0Y354 149 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 SRGAP2O75044 1071 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 DLDP09622 509 aaKnown RBP23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 DESP17661 470 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 POLR2EP19388 210 aaKnown RBP23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 MZF1P28698 734 aaPredicted RBP23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 ZNF177Q13360 481 aaPredicted RBP23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 E2F5Q15329 346 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 PTPRNQ16849 979 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 PLEKHG6Q3KR16 790 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 FAM72AQ5TYM5 149 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 SDE2Q6IQ49 451 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 FAM72DQ6L9T8 149 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 KIAA1211LQ6NV74 962 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 SLFN11Q7Z7L1 901 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 RASSF3Q86WH2 238 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 FAM72BQ86X60 149 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 APCDD1Q8J025 514 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 ATRIPQ8WXE1 791 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 ALG14Q96F25 216 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 NUP85Q9BW27 656 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 PACSIN1Q9BY11 444 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 SPTLC3Q9NUV7 552 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 MPP6Q9NZW5 540 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 PPARGC1AQ9UBK2 798 aaKnown RBP23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 ZNF212Q9UDV6 495 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 FZD10Q9ULW2 581 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 TBC1D30Q9Y2I9 924 aa23.4■■□□□ 1.34
SFSWAP-204ENST00000535399 ATP5BP06576 529 aaKnown RBP23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 PLK1P53350 603 aa23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 OXCT1P55809 520 aa23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 SLC12A1Q13621 1099 aa23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 POLMQ9NP87 494 aaPredicted RBP23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 NEU3Q9UQ49 428 aa23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 OR51B4Q9Y5P0 310 aa23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 RAD54BQ9Y620 910 aa23.39■■□□□ 1.33
SFSWAP-204ENST00000535399 TCRBV21S2A2A0A5A6 115 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 AXIN1O15169 862 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 HRO43593 1189 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 H2AFZP0C0S5 128 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 PRKCHP24723 683 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 PLA2G5P39877 138 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 AIF1P55008 147 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 EFHC2Q5JST6 749 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 ANO7Q6IWH7 933 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 H2AFVQ71UI9 128 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 TFAP2DQ7Z6R9 452 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 PYROXD2Q8N2H3 581 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 MDGA1Q8NFP4 955 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 PEBP4Q96S96 227 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 ZYG11BQ9C0D3 744 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 TMEM245Q9H330 911 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 PLA2G4CQ9UP65 541 aa23.38■■□□□ 1.33
SFSWAP-204ENST00000535399 LRCH4O75427 683 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 RNF8O76064 485 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 ALDH1A2O94788 518 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 LRIG2O94898 1065 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 MOCS3O95396 460 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 ASLP04424 464 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 MIPP30301 263 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 L1CAMP32004 1257 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 CTSOP43234 321 aaPredicted RBP23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 FNDC3BQ53EP0 1204 aaKnown RBP23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 SERPINA13PQ6UXR4 307 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 CYP4V2Q6ZWL3 525 aaPredicted RBP23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 FAM122AQ96E09 287 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 MYO19Q96H55 970 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 BTBD6Q96KE9 485 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 MRGPRX3Q96LB0 322 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 PANX2Q96RD6 677 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 FEM1AQ9BSK4 669 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 ANAPC7Q9UJX3 599 aa23.37■■□□□ 1.33
SFSWAP-204ENST00000535399 TMEM253P0C7T8 217 aa23.36■■□□□ 1.33
SFSWAP-204ENST00000535399 FECHP22830 423 aa23.36■■□□□ 1.33
SFSWAP-204ENST00000535399 CDC25BP30305 580 aa23.36■■□□□ 1.33
SFSWAP-204ENST00000535399 SRSF5Q13243 272 aaKnown RBP23.36■■□□□ 1.33
SFSWAP-204ENST00000535399 ACAP1Q15027 740 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms