RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 TMCC1O94876 653 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 TNFAIP8O95379 198 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 CRTAMO95727 393 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 TSPAN8P19075 237 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 PTPN7P35236 360 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 FKBP1AP62942 108 aaKnown RBP16.26■□□□□ 0.19
MCF2L-232ENST00000535094 RALGDSQ12967 914 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 MPP3Q13368 585 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 TEX44Q53QW1 395 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 STYK1Q6J9G0 422 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 LPCAT2Q7L5N7 544 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 MYO1HQ8N1T3 1032 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 LRRC39Q96DD0 335 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 PRDM12Q9H4Q4 367 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 TMEM134Q9H6X4 195 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 MINDY3Q9H8M7 445 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 TDRKHQ9Y2W6 561 aaKnown RBP16.26■□□□□ 0.19
MCF2L-232ENST00000535094 SMIM31A0A1B0GVY4 71 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 LTFP02788 710 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 ZFXP17010 805 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-232ENST00000535094 C16orf72Q14CZ0 275 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 PCLAFQ15004 111 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 KIF19Q2TAC6 998 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 FAM83AQ86UY5 434 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 FBXO16Q8IX29 292 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-232ENST00000535094 CERS2Q96G23 380 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 CHST12Q9NRB3 414 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 CHCHD3Q9NX63 227 aaKnown RBP16.26■□□□□ 0.19
MCF2L-232ENST00000535094 HACL1Q9UJ83 578 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 PSMD13Q9UNM6 376 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 H3BSA7 217 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 ACKR2O00590 384 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 GIPC1O14908 333 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 STBD1O95210 358 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 ME2P23368 584 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 PRKCHP24723 683 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 SLC6A3Q01959 620 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 MSLNQ13421 630 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-232ENST00000535094 HABP4Q5JVS0 413 aaKnown RBP16.26■□□□□ 0.19
MCF2L-232ENST00000535094 KLHDC10Q6PID8 442 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 CCDC185Q8N715 623 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 ATXN3LQ9H3M9 355 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 EFCAB1Q9HAE3 211 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 THEGQ9P2T0 379 aa16.26■□□□□ 0.19
MCF2L-232ENST00000535094 ABCA3Q99758 1704 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 CILPO75339 1184 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 GRIA2P42262 883 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 RABGGTBP53611 331 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 CLDN10P78369 228 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 SLC10A2Q12908 348 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-232ENST00000535094 CERCAMQ5T4B2 595 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 FBXL19Q6PCT2 694 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 ZNF778Q96MU6 729 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 PCDHAC1Q9H158 963 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 SIX4Q9UIU6 781 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 SORCS3Q9UPU3 1222 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 ATP6AP2A0A1C7CYW4 349 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 M0QYT0 321 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 ATP6AP2O75787 350 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 C2P06681 752 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 HNRNPLP14866 589 aaKnown RBP eCLIP16.25■□□□□ 0.195e-9■■■■■ 27.5
MCF2L-232ENST00000535094 GRIA4P48058 902 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 ITKQ08881 620 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 SIX6OS1Q8N1H7 587 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 DRAXINQ8NBI3 349 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-232ENST00000535094 PDCD6IPQ8WUM4 868 aaKnown RBP16.25■□□□□ 0.19
MCF2L-232ENST00000535094 P2RY11Q96G91 374 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 CELF6Q96J87 481 aaKnown RBP16.25■□□□□ 0.19
MCF2L-232ENST00000535094 FAM167AQ96KS9 214 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 GATA5Q9BWX5 397 aaPredicted RBP16.25■□□□□ 0.19
MCF2L-232ENST00000535094 PDLIM7Q9NR12 457 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 VANGL2Q9ULK5 521 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 NFASCO94856 1347 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 UTRNP46939 3433 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 TXNP10599 105 aaKnown RBP16.25■□□□□ 0.19
MCF2L-232ENST00000535094 ZNF460Q14592 562 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 AGKQ53H12 422 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.25■□□□□ 0.19
MCF2L-232ENST00000535094 MAPK15Q8TD08 544 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 ACTRT2Q8TDY3 377 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 ATP6V1E2Q96A05 226 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 CDH19Q9H159 772 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 VPS33BQ9H267 617 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 NDUFA13Q9P0J0 144 aa16.25■□□□□ 0.19
MCF2L-232ENST00000535094 FAM159BA6NKW6 160 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 SERPINB8P50452 374 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 TRNP1Q6NT89 227 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 KCTD4Q8WVF5 259 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CYGBQ8WWM9 190 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 MCRS1Q96EZ8 462 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CSPG4P5Q96PW8 444 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CIB1Q99828 191 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 PCDHGB4Q9UN71 923 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 PCDHGB5Q9Y5G0 923 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 HEMK1Q9Y5R4 338 aaPredicted RBP16.24■□□□□ 0.19
MCF2L-232ENST00000535094 STYXL1Q9Y6J8 313 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 CDK5RAP2Q96SN8 1893 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 A0A0A0MRY4 1105 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 TCRBV5S1A1TA0A578 114 aa16.24■□□□□ 0.19
MCF2L-232ENST00000535094 PGAM1P18669 254 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms