RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RWDD2BP57060 319 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 IFT88Q13099 833 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 PDK2Q15119 407 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 ZNF77Q15935 545 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 PUS10Q3MIT2 529 aaKnown RBP12.68□□□□□ -0.38
SCARB1-204ENST00000535005 ATP13A4Q4VNC1 1196 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 KCNT1Q5JUK3 1230 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 VSIG1Q86XK7 387 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 CACNA2D3Q8IZS8 1091 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 EXD1Q8NHP7 514 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 CASKIN2Q8WXE0 1202 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 ALG3Q92685 438 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
SCARB1-204ENST00000535005 EPS15L1Q9UBC2 864 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 AGO1Q9UL18 857 aaKnown RBP12.68□□□□□ -0.38
SCARB1-204ENST00000535005 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
SCARB1-204ENST00000535005 AP4E1Q9UPM8 1137 aa12.68□□□□□ -0.38
SCARB1-204ENST00000535005 ZNF487B1APH4 448 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 IRF1P10914 325 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 FCARP24071 287 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 L1CAMP32004 1257 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 SEMA3BQ13214 749 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 TAZQ16635 292 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 CA9Q16790 459 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 SMTNL2Q2TAL5 461 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 ANKRD20A8PQ5CZ79 823 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 KCTD16Q68DU8 428 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 TTC19Q6DKK2 380 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 CYB5D1Q6P9G0 228 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 CROCCP2Q86T23 111 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 DENND1CQ8IV53 801 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 FAM217AQ8IXS0 508 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 RCOR2Q8IZ40 523 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 CCHCR1Q8TD31 782 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 PRMT1Q99873 361 aaKnown RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 CARD9Q9H257 536 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 PCDH18Q9HCL0 1135 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 TMPRSS4Q9NRS4 437 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.67□□□□□ -0.383e-8■□□□□ 10.2
SCARB1-204ENST00000535005 XPO7Q9UIA9 1087 aaKnown RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 HS3ST4Q9Y661 456 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 DOCK8Q8NF50 2099 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 GFRA2O00451 464 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 MOCS2O96007 188 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 KDELR1P24390 212 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 GBP2P32456 591 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 HTR7P34969 479 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 HCAR3P49019 387 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 COPS2P61201 443 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 PPP2R2AP63151 447 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 LMNB2Q03252 620 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 SMAD2Q15796 467 aaKnown RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 C5orf22Q49AR2 442 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 MS4A13Q5J8X5 152 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 ARTNQ5T4W7 220 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 ADGRF1Q5T601 910 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 PIK3R6Q5UE93 754 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 MANEALQ5VSG8 457 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 GKAP1Q5VSY0 366 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 NADSYN1Q6IA69 706 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 MAP7D3Q8IWC1 876 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 RIN3Q8TB24 985 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 ACTRT1Q8TDG2 376 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 IFT81Q8WYA0 676 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 RAPGEF5Q92565 580 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 HSPH1Q92598 858 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 ACSF2Q96CM8 615 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 RSPRY1Q96DX4 576 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 RBM41Q96IZ5 413 aaKnown RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 DDX50Q9BQ39 737 aaKnown RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 DHX35Q9H5Z1 703 aaKnown RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 GPATCH2LQ9NWQ4 482 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 RCOR3Q9P2K3 495 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 OR12D3Q9UGF7 316 aa12.67□□□□□ -0.38
SCARB1-204ENST00000535005 NUP210Q8TEM1 1887 aaPredicted RBP12.67□□□□□ -0.38
SCARB1-204ENST00000535005 HELZP42694 1942 aaKnown RBP12.66□□□□□ -0.38
SCARB1-204ENST00000535005 C3orf70A6NLC5 250 aaPredicted RBP12.66□□□□□ -0.38
SCARB1-204ENST00000535005 KRT1P04264 644 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 FAM153BP0C7A2 387 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 GJC1P36383 396 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 VIPR2P41587 438 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 RIPK1Q13546 671 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 PPP2R5EQ16537 467 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 FAM153CQ494X1 144 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
SCARB1-204ENST00000535005 ZNF683Q8IZ20 524 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 PYROXD2Q8N2H3 581 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 CPXM2Q8N436 756 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 KCTD6Q8NC69 237 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 ELSPBP1Q96BH3 223 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 MIEF2Q96C03 454 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 OTUB2Q96DC9 234 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 LRRC3BQ96PB8 259 aa12.66□□□□□ -0.38
SCARB1-204ENST00000535005 KCTD15Q96SI1 283 aaPredicted RBP12.66□□□□□ -0.38
SCARB1-204ENST00000535005 PHF7Q9BWX1 381 aaPredicted RBP12.66□□□□□ -0.38
SCARB1-204ENST00000535005 MAGEB5Q9BZ81 275 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms