RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 CREB3O43889 395 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 HARS2P49590 506 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ARSEP51690 589 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 DYNLT1P63172 113 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 EFEMP1Q12805 493 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TEAD2Q15562 447 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 SMAD2Q15796 467 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ZC3H12AQ5D1E8 599 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 OTUD1Q5VV17 481 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 SLC9A4Q6AI14 798 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 OTOP3Q7RTS5 596 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 BBOF1Q8ND07 529 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ITFG1Q8TB96 612 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 SHKBP1Q8TBC3 707 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 FGF13Q92913 245 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 NKD2Q969F2 451 aaPredicted RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TCEAL4Q96EI5 215 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 C1orf74Q96LT6 269 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CSPG4P5Q96PW8 444 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 LRRC1Q9BTT6 524 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 DCLK3Q9C098 648 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 TASP1Q9H6P5 420 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 CATSPERBQ9H7T0 1116 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 FAM114A2Q9NRY5 505 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 OR12D3Q9UGF7 316 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 ZNF148Q9UQR1 794 aa11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 DRG1Q9Y295 367 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-218ENST00000533761 COL6A3P12111 3177 aa11.27□□□□□ -0.6
CCDC90B-218ENST00000533761 NOTCH4Q99466 2003 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 SIAH2O43255 324 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 RAD51CO43502 376 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 LIASO43766 372 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 ITGAVP06756 1048 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 CD48P09326 243 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 GJA1P17302 382 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 HDCP19113 662 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 MX2P20592 715 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 TNFRSF8P28908 595 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 STIP1P31948 543 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 AVPR1AP37288 418 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC11A2P49281 568 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 ATXN1P54253 815 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 VCPP55072 806 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 NRG1Q02297 640 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 GUCY2DQ02846 1103 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 TFF2Q03403 129 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 CALCOCO2Q13137 446 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 XRCC4Q13426 336 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 SIX1Q15475 284 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 GPR158Q5T848 1215 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 TXNDC8Q6A555 127 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 RFX8Q6ZV50 586 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 GET4Q7L5D6 327 aaPredicted RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 MIB1Q86YT6 1006 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 MAB21L3Q8N8X9 362 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 C1orf54Q8WWF1 131 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 ING5Q8WYH8 240 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 PLD4Q96BZ4 506 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 DDX50Q9BQ39 737 aaKnown RBP11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 PARD6BQ9BYG5 372 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 BRD8Q9H0E9 1235 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 RETREG1Q9H6L5 497 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 ANKZF1Q9H8Y5 726 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 TRPC7Q9HCX4 862 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 SFMBT1Q9UHJ3 866 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 RAB21Q9UL25 225 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 CDH7Q9ULB5 785 aa11.27□□□□□ -0.61
CCDC90B-218ENST00000533761 TRAV19A0A0A6YYK7 116 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 SLC12A8A0AV02 714 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 KCNU1A8MYU2 1149 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 HACD1B0YJ81 288 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 PPP1R12AO14974 1030 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 MOSPD3O75425 235 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 STK10O94804 968 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CKMP06732 381 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 LAMP2P13473 410 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CEBPBP17676 345 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 EPHB2P29323 1055 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 GBP2P32456 591 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 PGFP49763 221 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 DRG2P55039 364 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 PITX1P78337 314 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CYP4F8P98187 520 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 OTUD4Q01804 1114 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 EIF4EBP2Q13542 120 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 LLGL1Q15334 1064 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 C4orf22Q6V702 233 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CEP128Q6ZU80 1094 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 JAMLQ86YT9 394 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CDKL3Q8IVW4 592 aaPredicted RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 CMTM8Q8IZV2 173 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 LZTR1Q8N653 840 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 ACTL9Q8TC94 416 aa11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 ATXN2LQ8WWM7 1075 aaKnown RBP11.26□□□□□ -0.61
CCDC90B-218ENST00000533761 KCTD15Q96SI1 283 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms