RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 FAM160A2Q8N612 972 aaPredicted RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 FAM172AQ8WUF8 416 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 CYB5D2Q8WUJ1 264 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 SORCS1Q8WY21 1168 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 CENPIQ92674 756 aaPredicted RBP16.32■□□□□ 0.2
TSKU-204ENST00000533752 IGSF8Q969P0 613 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 CNPY3Q9BT09 278 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 TAS2R14Q9NYV8 317 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 RAD54BQ9Y620 910 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 SCINQ9Y6U3 715 aa16.32■□□□□ 0.2
TSKU-204ENST00000533752 ZNF292O60281 2723 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 IGLV3-10A0A075B6K4 115 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 WASH3PC4AMC7 463 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 DDX3XO00571 662 aaKnown RBP eCLIP16.31■□□□□ 0.22e-9■■■■■ 41
TSKU-204ENST00000533752 GJB6O95452 261 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 FTLP02792 175 aaPredicted RBP16.31■□□□□ 0.2
TSKU-204ENST00000533752 EPHX1P07099 455 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 SRPRAP08240 638 aaKnown RBP16.31■□□□□ 0.2
TSKU-204ENST00000533752 SKILP12757 684 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 NDUFV2P19404 249 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 PRKCHP24723 683 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 CASP14P31944 242 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 GGCXP38435 758 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 P2RY2P41231 377 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 AIF1P55008 147 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 NRG1Q02297 640 aaPredicted RBP16.31■□□□□ 0.2
TSKU-204ENST00000533752 PTPRNQ16849 979 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 PLK5Q496M5 336 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 FSCBQ5H9T9 825 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 PPP1R15BQ5SWA1 713 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 HGSNATQ68CP4 663 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 CXorf57Q6NSI4 855 aaKnown RBP16.31■□□□□ 0.2
TSKU-204ENST00000533752 KBTBD6Q86V97 674 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 CIR1Q86X95 450 aaPredicted RBP16.31■□□□□ 0.2
TSKU-204ENST00000533752 CPLX3Q8WVH0 158 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 NTAN1Q96AB6 310 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 TMEM245Q9H330 911 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 RETREG1Q9H6L5 497 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 ANLNQ9NQW6 1124 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 SUN2Q9UH99 717 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 PCDHGA5Q9Y5G8 931 aa16.31■□□□□ 0.2
TSKU-204ENST00000533752 SPAG17Q6Q759 2223 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 E9PAM4 449 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 I6L893 689 aaPredicted RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 ADRA1BP35368 520 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 PLK1P53350 603 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 HDAC4P56524 1084 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 ECT2LQ008S8 904 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 SCAPQ12770 1279 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 MAMLD1Q13495 774 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 CAMK2GQ13555 558 aaPredicted RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 PLEKHA7Q6IQ23 1121 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 SLC36A4Q6YBV0 504 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 C14orf80Q86SX3 495 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 SETD3Q86TU7 594 aaPredicted RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 METTL3Q86U44 580 aaKnown RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 VSTM4Q8IW00 320 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 DRC7Q8IY82 874 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 ZNF683Q8IZ20 524 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 ZNF653Q96CK0 615 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.3■□□□□ 0.2
TSKU-204ENST00000533752 PRDM16Q9HAZ2 1276 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 MRPL47Q9HD33 250 aaKnown RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 PPARGC1AQ9UBK2 798 aaKnown RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 INTS6Q9UL03 887 aaKnown RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 TBC1D30Q9Y2I9 924 aa16.3■□□□□ 0.2
TSKU-204ENST00000533752 MUC22E2RYF6 1773 aaPredicted RBP16.3■□□□□ 0.2
TSKU-204ENST00000533752 WDR87Q6ZQQ6 2873 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 DRGXA6NNA5 263 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 CCP110O43303 1012 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 FOXD2O60548 495 aaPredicted RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 EPN2O95208 641 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 HNRNPH3P31942 346 aaKnown RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 NNMTP40261 264 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 RPL7AP62424 266 aaKnown RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 ARID5BQ14865 1188 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 MAP7D1Q3KQU3 841 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 SPDYCQ5MJ68 293 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 C6orf118Q5T5N4 469 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 SH3PXD2AQ5TCZ1 1133 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 PMS2CLQ68D20 193 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 SARM1Q6SZW1 724 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 KIAA1324Q6UXG2 1013 aaKnown RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 TMC6Q7Z403 805 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 OR2T3Q8NH03 318 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 FNIP1Q8TF40 1166 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 PRCCQ92733 491 aaPredicted RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 ZYG11BQ9C0D3 744 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 ISCUQ9H1K1 167 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 OSBPL2Q9H1P3 480 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 ZNHIT6Q9NWK9 470 aaKnown RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 CNOT8Q9UFF9 292 aaKnown RBP16.29■□□□□ 0.2
TSKU-204ENST00000533752 ADAMTS1Q9UHI8 967 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 VPS28Q9UK41 221 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 ERVW-1Q9UQF0 538 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 CKAP5Q14008 2032 aa16.29■□□□□ 0.2
TSKU-204ENST00000533752 EML5Q05BV3 1969 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms