RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 RAB20Q9NX57 234 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 CDH9Q9ULB4 789 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 CBLCQ9ULV8 474 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 USP15Q9Y4E8 981 aaPredicted RBP8.1□□□□□ -1.11
CASP4-212ENST00000533730 TSC2P49815 1807 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 SZT2Q5T011 3432 aa8.1□□□□□ -1.11
CASP4-212ENST00000533730 CCDC195A0A1B0GUA6 201 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 MTMR11A4FU01 709 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 KRT37O76014 449 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 ZRANB2O95218 330 aaKnown RBP eCLIP8.09□□□□□ -1.11
CASP4-212ENST00000533730 TGFB1P01137 390 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 AFPP02771 609 aaKnown RBP8.09□□□□□ -1.11
CASP4-212ENST00000533730 TPM2P07951 284 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 SPATA31D3P0C874 917 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 EEF1GP26641 437 aaKnown RBP8.09□□□□□ -1.11
CASP4-212ENST00000533730 GNL1P36915 607 aaPredicted RBP8.09□□□□□ -1.11
CASP4-212ENST00000533730 MTIF2P46199 727 aaKnown RBP8.09□□□□□ -1.11
CASP4-212ENST00000533730 ALDH1A3P47895 512 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 TUFMP49411 452 aaKnown RBP8.09□□□□□ -1.11
CASP4-212ENST00000533730 KCNQ1P51787 676 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 YWHAEP62258 255 aaKnown RBP8.09□□□□□ -1.11
CASP4-212ENST00000533730 ADCY1Q08828 1119 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 CLUL1Q15846 466 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 CPSF6Q16630 551 aaKnown RBP eCLIP8.09□□□□□ -1.11
CASP4-212ENST00000533730 SLC39A12Q504Y0 691 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 ERAP2Q6P179 960 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 TMC5Q6UXY8 1006 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 C4orf50Q6ZRC1 276 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 SPATA31D4Q6ZUB0 917 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 ZNF765Q7L2R6 523 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 UNC93AQ86WB7 457 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 LEMD2Q8NC56 503 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 ANKRD20A12PQ8NF67 263 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 OR6B3Q8NGW1 331 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 OR10T2Q8NGX3 314 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 KBTBD7Q8WVZ9 684 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 SMG7Q92540 1137 aaKnown RBP8.09□□□□□ -1.11
CASP4-212ENST00000533730 TTC17Q96AE7 1141 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 RTP3Q9BQQ7 232 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 SYT15Q9BQS2 421 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 DUSP23Q9BVJ7 150 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 HDAC8Q9BY41 377 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 GPATCH2Q9NW75 528 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 INVSQ9Y283 1065 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 NR2E1Q9Y466 385 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 ASB3Q9Y575 518 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 INSL5Q9Y5Q6 135 aa8.09□□□□□ -1.11
CASP4-212ENST00000533730 PLXNA3P51805 1871 aa8.09□□□□□ -1.12
CASP4-212ENST00000533730 ATP8B3O60423 1300 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 MTCL1Q9Y4B5 1905 aaKnown RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 GTPBP10A4D1E9 387 aaKnown RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 KLHL33A6NCF5 533 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 A8MXQ7 604 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 LEFTY1O75610 366 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 RFPL2O75678 378 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CAVIN2O95810 425 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CBX7O95931 251 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 OR4Q2P0C623 313 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 TBXAS1P24557 533 aaPredicted RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 EPHB3P54753 998 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 RPL10AP62906 217 aaKnown RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 MYL5Q02045 173 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 INCA1Q0VD86 236 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 VEPH1Q14D04 833 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 ACAP2Q15057 778 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 TERF2Q15554 542 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 MAN2A1Q16706 1144 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CFAP221Q4G0U5 840 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CBWD6Q4V339 395 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CBWD3Q5JTY5 395 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CBWD5Q5RIA9 395 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 IQCEQ6IPM2 695 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 FAM171BQ6P995 826 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 SCARA5Q6ZMJ2 495 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 ITIH5Q86UX2 942 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 OSTM1Q86WC4 334 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CREBRFQ8IUR6 639 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 SPATA2LQ8IUW3 424 aaPredicted RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 ADHFE1Q8IWW8 467 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 C12orf76Q8N812 135 aaPredicted RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 VPS37AQ8NEZ2 397 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 ZNF707Q96C28 371 aaPredicted RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 FAM81BQ96LP2 452 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 CEP295NLQ96MC4 621 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 ZNF512Q96ME7 567 aaPredicted RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 NT5C1BQ96P26 610 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 PGLYRP2Q96PD5 576 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 MED15Q96RN5 788 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 TMEM209Q96SK2 561 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 PKMYT1Q99640 499 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 BPIFA3Q9BQP9 254 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 MRPL45Q9BRJ2 306 aaKnown RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 APOL5Q9BWW9 433 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 PHF7Q9BWX1 381 aaPredicted RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 SLC12A9Q9BXP2 914 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 WDR6Q9NNW5 1121 aaKnown RBP8.08□□□□□ -1.12
CASP4-212ENST00000533730 CATSPERZQ9NTU4 200 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 NFE2L3Q9Y4A8 694 aa8.08□□□□□ -1.12
CASP4-212ENST00000533730 YIPF1Q9Y548 306 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms